Gene : Cagra.9217s0001 C. grandiflora v1.1
Defline:  (1 of 4) 3.1.3.16//3.1.3.48 - Protein-serine/threonine phosphatase / Serine/threonine specific protein phosphatase // Protein-tyrosine-phosphatase / PTPase Genomic Order:  1
Name:  ? Cagra.9217s0001 Secondary Identifier:  ? PAC:28914570
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9217s0001 0.5kb upstream 0.5kb upstream 1058 true Scaffold9217: 1-1058 Capsella grandiflora
Cagra.9217s0001 0.5kb upstream 0.5kb upstream 19 false Scaffold9217: 1-19 Capsella grandiflora
Cagra.9217s0001 0.5kb downstream 0.5kb downstream 1539 true Scaffold9217: 20-1558 Capsella grandiflora
Cagra.9217s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold9217: 1059-1558 Capsella grandiflora
Cagra.9217s0001 1.0kb upstream 1.0kb upstream 1058 true Scaffold9217: 1-1058 Capsella grandiflora
Cagra.9217s0001 1.0kb upstream 1.0kb upstream 19 false Scaffold9217: 1-19 Capsella grandiflora
Cagra.9217s0001 1.0kb downstream 1.0kb downstream 2039 true Scaffold9217: 20-2058 Capsella grandiflora
Cagra.9217s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold9217: 1059-2058 Capsella grandiflora
Cagra.9217s0001 2.0kb upstream 2.0kb upstream 1058 true Scaffold9217: 1-1058 Capsella grandiflora
Cagra.9217s0001 2.0kb upstream 2.0kb upstream 19 false Scaffold9217: 1-19 Capsella grandiflora
Cagra.9217s0001 2.0kb downstream 2.0kb downstream 3039 true Scaffold9217: 20-3058 Capsella grandiflora
Cagra.9217s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold9217: 1059-3058 Capsella grandiflora
Cagra.9217s0001 5.0kb upstream 5.0kb upstream 1058 true Scaffold9217: 1-1058 Capsella grandiflora
Cagra.9217s0001 5.0kb upstream 5.0kb upstream 19 false Scaffold9217: 1-19 Capsella grandiflora
Cagra.9217s0001 5.0kb downstream 5.0kb downstream 6039 true Scaffold9217: 20-6058 Capsella grandiflora
Cagra.9217s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold9217: 1059-6058 Capsella grandiflora
Cagra.9217s0001 10.0kb upstream 10.0kb upstream 1058 true Scaffold9217: 1-1058 Capsella grandiflora
Cagra.9217s0001 10.0kb upstream 10.0kb upstream 19 false Scaffold9217: 1-19 Capsella grandiflora
Cagra.9217s0001 10.0kb downstream 10.0kb downstream 11039 true Scaffold9217: 20-11058 Capsella grandiflora
Cagra.9217s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold9217: 1059-11058 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028012 5273 Angiosperm View MSA
122380524 5261 Brassicaceae View MSA
123802764 5264 Brassicales-Malvales View MSA
124299931 5266 SBM View MSA
124151229 5268 Malvidae View MSA
123876708 5270 Rosid View MSA
123460348 5271 Pentapetalae View MSA
122495724 5272 Eudicot View MSA
121297567 5274 Embryophyte View MSA
123335609 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain