Gene : Cagra.9323s0001 C. grandiflora v1.1
Defline:  (1 of 9) PF05633 - Protein of unknown function (DUF793) (DUF793) Genomic Order:  1
Name:  ? Cagra.9323s0001 Secondary Identifier:  ? PAC:28919125
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9323s0001 0.5kb upstream 0.5kb upstream 1840 true Scaffold9323: 571-2410 Capsella grandiflora
Cagra.9323s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold9323: 571-1070 Capsella grandiflora
Cagra.9323s0001 0.5kb downstream 0.5kb downstream 1840 true Scaffold9323: 1071-2910 Capsella grandiflora
Cagra.9323s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold9323: 2411-2910 Capsella grandiflora
Cagra.9323s0001 1.0kb upstream 1.0kb upstream 2340 true Scaffold9323: 71-2410 Capsella grandiflora
Cagra.9323s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold9323: 71-1070 Capsella grandiflora
Cagra.9323s0001 1.0kb downstream 1.0kb downstream 2340 true Scaffold9323: 1071-3410 Capsella grandiflora
Cagra.9323s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold9323: 2411-3410 Capsella grandiflora
Cagra.9323s0001 2.0kb upstream 2.0kb upstream 2410 true Scaffold9323: 1-2410 Capsella grandiflora
Cagra.9323s0001 2.0kb upstream 2.0kb upstream 1070 false Scaffold9323: 1-1070 Capsella grandiflora
Cagra.9323s0001 2.0kb downstream 2.0kb downstream 3340 true Scaffold9323: 1071-4410 Capsella grandiflora
Cagra.9323s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold9323: 2411-4410 Capsella grandiflora
Cagra.9323s0001 5.0kb upstream 5.0kb upstream 2410 true Scaffold9323: 1-2410 Capsella grandiflora
Cagra.9323s0001 5.0kb upstream 5.0kb upstream 1070 false Scaffold9323: 1-1070 Capsella grandiflora
Cagra.9323s0001 5.0kb downstream 5.0kb downstream 6340 true Scaffold9323: 1071-7410 Capsella grandiflora
Cagra.9323s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold9323: 2411-7410 Capsella grandiflora
Cagra.9323s0001 10.0kb upstream 10.0kb upstream 2410 true Scaffold9323: 1-2410 Capsella grandiflora
Cagra.9323s0001 10.0kb upstream 10.0kb upstream 1070 false Scaffold9323: 1-1070 Capsella grandiflora
Cagra.9323s0001 10.0kb downstream 10.0kb downstream 11340 true Scaffold9323: 1071-12410 Capsella grandiflora
Cagra.9323s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold9323: 2411-12410 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334500 5261 Brassicaceae Singleton cluster - no MSA
123838187 5264 Brassicales-Malvales View MSA
124322410 5266 SBM View MSA
124169136 5268 Malvidae View MSA
124065163 5270 Rosid View MSA
123741032 5271 Pentapetalae View MSA
122770001 5272 Eudicot View MSA
122049530 5273 Angiosperm View MSA
121311457 5274 Embryophyte View MSA
123348752 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain