Gene : Cagra.9327s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR13596 - SMALL EDRK-RICH FACTOR 1 Genomic Order:  1
Name:  ? Cagra.9327s0001 Secondary Identifier:  ? PAC:28902445
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9327s0001 0.5kb upstream 0.5kb upstream 1923 true Scaffold9327: 5798-7720 Capsella grandiflora
Cagra.9327s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold9327: 7221-7720 Capsella grandiflora
Cagra.9327s0001 0.5kb downstream 0.5kb downstream 1923 true Scaffold9327: 5298-7220 Capsella grandiflora
Cagra.9327s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold9327: 5298-5797 Capsella grandiflora
Cagra.9327s0001 1.0kb upstream 1.0kb upstream 2423 true Scaffold9327: 5798-8220 Capsella grandiflora
Cagra.9327s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold9327: 7221-8220 Capsella grandiflora
Cagra.9327s0001 1.0kb downstream 1.0kb downstream 2423 true Scaffold9327: 4798-7220 Capsella grandiflora
Cagra.9327s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold9327: 4798-5797 Capsella grandiflora
Cagra.9327s0001 2.0kb upstream 2.0kb upstream 3423 true Scaffold9327: 5798-9220 Capsella grandiflora
Cagra.9327s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold9327: 7221-9220 Capsella grandiflora
Cagra.9327s0001 2.0kb downstream 2.0kb downstream 3423 true Scaffold9327: 3798-7220 Capsella grandiflora
Cagra.9327s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold9327: 3798-5797 Capsella grandiflora
Cagra.9327s0001 5.0kb upstream 5.0kb upstream 6423 true Scaffold9327: 5798-12220 Capsella grandiflora
Cagra.9327s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold9327: 7221-12220 Capsella grandiflora
Cagra.9327s0001 5.0kb downstream 5.0kb downstream 6423 true Scaffold9327: 798-7220 Capsella grandiflora
Cagra.9327s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold9327: 798-5797 Capsella grandiflora
Cagra.9327s0001 10.0kb upstream 10.0kb upstream 6548 true Scaffold9327: 5798-12345 Capsella grandiflora
Cagra.9327s0001 10.0kb upstream 10.0kb upstream 5125 false Scaffold9327: 7221-12345 Capsella grandiflora
Cagra.9327s0001 10.0kb downstream 10.0kb downstream 7220 true Scaffold9327: 1-7220 Capsella grandiflora
Cagra.9327s0001 10.0kb downstream 10.0kb downstream 5797 false Scaffold9327: 1-5797 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029149 5273 Angiosperm View MSA
122380399 5261 Brassicaceae View MSA
123838435 5264 Brassicales-Malvales View MSA
124322452 5266 SBM View MSA
124250071 5268 Malvidae View MSA
124074834 5270 Rosid View MSA
123749085 5271 Pentapetalae View MSA
122786752 5272 Eudicot View MSA
121349667 5274 Embryophyte View MSA
123424353 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain