Gene : Cagra.9392s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10871:SF6 - 40S RIBOSOMAL PROTEIN S18 Genomic Order:  1
Name:  ? Cagra.9392s0001 Secondary Identifier:  ? PAC:28919101
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9392s0001 0.5kb upstream 0.5kb upstream 1446 true Scaffold9392: 1-1446 Capsella grandiflora
Cagra.9392s0001 0.5kb upstream 0.5kb upstream 187 false Scaffold9392: 1-187 Capsella grandiflora
Cagra.9392s0001 0.5kb downstream 0.5kb downstream 1646 true Scaffold9392: 188-1833 Capsella grandiflora
Cagra.9392s0001 0.5kb downstream 0.5kb downstream 387 false Scaffold9392: 1447-1833 Capsella grandiflora
Cagra.9392s0001 1.0kb upstream 1.0kb upstream 1446 true Scaffold9392: 1-1446 Capsella grandiflora
Cagra.9392s0001 1.0kb upstream 1.0kb upstream 187 false Scaffold9392: 1-187 Capsella grandiflora
Cagra.9392s0001 1.0kb downstream 1.0kb downstream 1646 true Scaffold9392: 188-1833 Capsella grandiflora
Cagra.9392s0001 1.0kb downstream 1.0kb downstream 387 false Scaffold9392: 1447-1833 Capsella grandiflora
Cagra.9392s0001 2.0kb upstream 2.0kb upstream 1446 true Scaffold9392: 1-1446 Capsella grandiflora
Cagra.9392s0001 2.0kb upstream 2.0kb upstream 187 false Scaffold9392: 1-187 Capsella grandiflora
Cagra.9392s0001 2.0kb downstream 2.0kb downstream 1646 true Scaffold9392: 188-1833 Capsella grandiflora
Cagra.9392s0001 2.0kb downstream 2.0kb downstream 387 false Scaffold9392: 1447-1833 Capsella grandiflora
Cagra.9392s0001 5.0kb upstream 5.0kb upstream 1446 true Scaffold9392: 1-1446 Capsella grandiflora
Cagra.9392s0001 5.0kb upstream 5.0kb upstream 187 false Scaffold9392: 1-187 Capsella grandiflora
Cagra.9392s0001 5.0kb downstream 5.0kb downstream 1646 true Scaffold9392: 188-1833 Capsella grandiflora
Cagra.9392s0001 5.0kb downstream 5.0kb downstream 387 false Scaffold9392: 1447-1833 Capsella grandiflora
Cagra.9392s0001 10.0kb upstream 10.0kb upstream 1446 true Scaffold9392: 1-1446 Capsella grandiflora
Cagra.9392s0001 10.0kb upstream 10.0kb upstream 187 false Scaffold9392: 1-187 Capsella grandiflora
Cagra.9392s0001 10.0kb downstream 10.0kb downstream 1646 true Scaffold9392: 188-1833 Capsella grandiflora
Cagra.9392s0001 10.0kb downstream 10.0kb downstream 387 false Scaffold9392: 1447-1833 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122337810 5261 Brassicaceae View MSA
123778442 5264 Brassicales-Malvales View MSA
124276788 5266 SBM View MSA
124249653 5268 Malvidae View MSA
124071434 5270 Rosid View MSA
123753104 5271 Pentapetalae View MSA
122796798 5272 Eudicot View MSA
122048414 5273 Angiosperm View MSA
121348769 5274 Embryophyte View MSA
123423828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain