Gene : Cagra.9398s0001 C. grandiflora v1.1
Defline:  (1 of 10) 1.1.1.1 - Alcohol dehydrogenase / Aldehyde reductase Genomic Order:  1
Name:  ? Cagra.9398s0001 Secondary Identifier:  ? PAC:28893695
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5486 Capsella grandiflora pathologic  
Cgrandiflora PWY-5751 Capsella grandiflora pathologic  
Cgrandiflora PWY-6333 Capsella grandiflora pathologic  
Cgrandiflora PWY66-21 Capsella grandiflora pathologic  
Cgrandiflora PWY66-389 Capsella grandiflora pathologic  
Cgrandiflora PWY-6802 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9398s0001 0.5kb upstream 0.5kb upstream 1776 true Scaffold9398: 1-1776 Capsella grandiflora
Cagra.9398s0001 0.5kb upstream 0.5kb upstream 494 false Scaffold9398: 1-494 Capsella grandiflora
Cagra.9398s0001 0.5kb downstream 0.5kb downstream 1302 true Scaffold9398: 495-1796 Capsella grandiflora
Cagra.9398s0001 0.5kb downstream 0.5kb downstream 20 false Scaffold9398: 1777-1796 Capsella grandiflora
Cagra.9398s0001 1.0kb upstream 1.0kb upstream 1776 true Scaffold9398: 1-1776 Capsella grandiflora
Cagra.9398s0001 1.0kb upstream 1.0kb upstream 494 false Scaffold9398: 1-494 Capsella grandiflora
Cagra.9398s0001 1.0kb downstream 1.0kb downstream 1302 true Scaffold9398: 495-1796 Capsella grandiflora
Cagra.9398s0001 1.0kb downstream 1.0kb downstream 20 false Scaffold9398: 1777-1796 Capsella grandiflora
Cagra.9398s0001 2.0kb upstream 2.0kb upstream 1776 true Scaffold9398: 1-1776 Capsella grandiflora
Cagra.9398s0001 2.0kb upstream 2.0kb upstream 494 false Scaffold9398: 1-494 Capsella grandiflora
Cagra.9398s0001 2.0kb downstream 2.0kb downstream 1302 true Scaffold9398: 495-1796 Capsella grandiflora
Cagra.9398s0001 2.0kb downstream 2.0kb downstream 20 false Scaffold9398: 1777-1796 Capsella grandiflora
Cagra.9398s0001 5.0kb upstream 5.0kb upstream 1776 true Scaffold9398: 1-1776 Capsella grandiflora
Cagra.9398s0001 5.0kb upstream 5.0kb upstream 494 false Scaffold9398: 1-494 Capsella grandiflora
Cagra.9398s0001 5.0kb downstream 5.0kb downstream 1302 true Scaffold9398: 495-1796 Capsella grandiflora
Cagra.9398s0001 5.0kb downstream 5.0kb downstream 20 false Scaffold9398: 1777-1796 Capsella grandiflora
Cagra.9398s0001 10.0kb upstream 10.0kb upstream 1776 true Scaffold9398: 1-1776 Capsella grandiflora
Cagra.9398s0001 10.0kb upstream 10.0kb upstream 494 false Scaffold9398: 1-494 Capsella grandiflora
Cagra.9398s0001 10.0kb downstream 10.0kb downstream 1302 true Scaffold9398: 495-1796 Capsella grandiflora
Cagra.9398s0001 10.0kb downstream 10.0kb downstream 20 false Scaffold9398: 1777-1796 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365720 5261 Brassicaceae View MSA
123799021 5264 Brassicales-Malvales View MSA
124351414 5266 SBM View MSA
124249969 5268 Malvidae View MSA
124074336 5270 Rosid View MSA
123753594 5271 Pentapetalae View MSA
122797386 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain