Gene : Cagra.9415s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24349:SF116 - CALCIUM-DEPENDENT PROTEIN KINASE 7 Genomic Order:  5
Name:  ? Cagra.9415s0005 Secondary Identifier:  ? PAC:28900914
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9415s0005 0.5kb upstream 0.5kb upstream 3264 true Scaffold9415: 8972-12235 Capsella grandiflora
Cagra.9415s0005 0.5kb upstream 0.5kb upstream 303 false Scaffold9415: 11933-12235 Capsella grandiflora
Cagra.9415s0005 0.5kb downstream 0.5kb downstream 3461 true Scaffold9415: 8472-11932 Capsella grandiflora
Cagra.9415s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold9415: 8472-8971 Capsella grandiflora
Cagra.9415s0005 1.0kb upstream 1.0kb upstream 3264 true Scaffold9415: 8972-12235 Capsella grandiflora
Cagra.9415s0005 1.0kb upstream 1.0kb upstream 303 false Scaffold9415: 11933-12235 Capsella grandiflora
Cagra.9415s0005 1.0kb downstream 1.0kb downstream 3961 true Scaffold9415: 7972-11932 Capsella grandiflora
Cagra.9415s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold9415: 7972-8971 Capsella grandiflora
Cagra.9415s0005 2.0kb upstream 2.0kb upstream 3264 true Scaffold9415: 8972-12235 Capsella grandiflora
Cagra.9415s0005 2.0kb upstream 2.0kb upstream 303 false Scaffold9415: 11933-12235 Capsella grandiflora
Cagra.9415s0005 2.0kb downstream 2.0kb downstream 4961 true Scaffold9415: 6972-11932 Capsella grandiflora
Cagra.9415s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold9415: 6972-8971 Capsella grandiflora
Cagra.9415s0005 5.0kb upstream 5.0kb upstream 3264 true Scaffold9415: 8972-12235 Capsella grandiflora
Cagra.9415s0005 5.0kb upstream 5.0kb upstream 303 false Scaffold9415: 11933-12235 Capsella grandiflora
Cagra.9415s0005 5.0kb downstream 5.0kb downstream 7961 true Scaffold9415: 3972-11932 Capsella grandiflora
Cagra.9415s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold9415: 3972-8971 Capsella grandiflora
Cagra.9415s0005 10.0kb upstream 10.0kb upstream 3264 true Scaffold9415: 8972-12235 Capsella grandiflora
Cagra.9415s0005 10.0kb upstream 10.0kb upstream 303 false Scaffold9415: 11933-12235 Capsella grandiflora
Cagra.9415s0005 10.0kb downstream 10.0kb downstream 11932 true Scaffold9415: 1-11932 Capsella grandiflora
Cagra.9415s0005 10.0kb downstream 10.0kb downstream 8971 false Scaffold9415: 1-8971 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360233 5261 Brassicaceae View MSA
123836793 5264 Brassicales-Malvales View MSA
124342314 5266 SBM View MSA
124244480 5268 Malvidae View MSA
124061660 5270 Rosid View MSA
123751372 5271 Pentapetalae View MSA
122791900 5272 Eudicot View MSA
122045931 5273 Angiosperm View MSA
121348324 5274 Embryophyte View MSA
123380819 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain