Gene : Cagra.9415s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10811:SF16 - FRINGE-LIKE PROTEIN Genomic Order:  3
Name:  ? Cagra.9415s0003 Secondary Identifier:  ? PAC:28900917
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9415s0003 0.5kb upstream 0.5kb upstream 2238 true Scaffold9415: 3609-5846 Capsella grandiflora
Cagra.9415s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold9415: 3609-4108 Capsella grandiflora
Cagra.9415s0003 0.5kb downstream 0.5kb downstream 2238 true Scaffold9415: 4109-6346 Capsella grandiflora
Cagra.9415s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold9415: 5847-6346 Capsella grandiflora
Cagra.9415s0003 1.0kb upstream 1.0kb upstream 2738 true Scaffold9415: 3109-5846 Capsella grandiflora
Cagra.9415s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold9415: 3109-4108 Capsella grandiflora
Cagra.9415s0003 1.0kb downstream 1.0kb downstream 2738 true Scaffold9415: 4109-6846 Capsella grandiflora
Cagra.9415s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold9415: 5847-6846 Capsella grandiflora
Cagra.9415s0003 2.0kb upstream 2.0kb upstream 3738 true Scaffold9415: 2109-5846 Capsella grandiflora
Cagra.9415s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold9415: 2109-4108 Capsella grandiflora
Cagra.9415s0003 2.0kb downstream 2.0kb downstream 3738 true Scaffold9415: 4109-7846 Capsella grandiflora
Cagra.9415s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold9415: 5847-7846 Capsella grandiflora
Cagra.9415s0003 5.0kb upstream 5.0kb upstream 5846 true Scaffold9415: 1-5846 Capsella grandiflora
Cagra.9415s0003 5.0kb upstream 5.0kb upstream 4108 false Scaffold9415: 1-4108 Capsella grandiflora
Cagra.9415s0003 5.0kb downstream 5.0kb downstream 6738 true Scaffold9415: 4109-10846 Capsella grandiflora
Cagra.9415s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold9415: 5847-10846 Capsella grandiflora
Cagra.9415s0003 10.0kb upstream 10.0kb upstream 5846 true Scaffold9415: 1-5846 Capsella grandiflora
Cagra.9415s0003 10.0kb upstream 10.0kb upstream 4108 false Scaffold9415: 1-4108 Capsella grandiflora
Cagra.9415s0003 10.0kb downstream 10.0kb downstream 8127 true Scaffold9415: 4109-12235 Capsella grandiflora
Cagra.9415s0003 10.0kb downstream 10.0kb downstream 6389 false Scaffold9415: 5847-12235 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361744 5261 Brassicaceae View MSA
123838971 5264 Brassicales-Malvales View MSA
124349767 5266 SBM View MSA
124251096 5268 Malvidae View MSA
124070158 5270 Rosid View MSA
123749213 5271 Pentapetalae View MSA
122793908 5272 Eudicot View MSA
122048571 5273 Angiosperm View MSA
121350591 5274 Embryophyte View MSA
123381812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain