Gene : Cagra.9458s0001 C. grandiflora v1.1
Defline:  (1 of 5) 3.6.1.13//3.6.1.22//3.6.1.53 - ADP-ribose diphosphatase / ADPR-PPase // NAD(+) diphosphatase / NADP pyrophosphatase // Mn(2+)-dependent ADP-ribose/CDP-alcohol diphosphatase / Mn(2+)-dependent ADP-ribose/CDP-alcohol pyrophosphatase Genomic Order:  1
Name:  ? Cagra.9458s0001 Secondary Identifier:  ? PAC:28915244
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5381 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9458s0001 0.5kb upstream 0.5kb upstream 2682 true Scaffold9458: 1-2682 Capsella grandiflora
Cagra.9458s0001 0.5kb upstream 0.5kb upstream 33 false Scaffold9458: 1-33 Capsella grandiflora
Cagra.9458s0001 0.5kb downstream 0.5kb downstream 3149 true Scaffold9458: 34-3182 Capsella grandiflora
Cagra.9458s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold9458: 2683-3182 Capsella grandiflora
Cagra.9458s0001 1.0kb upstream 1.0kb upstream 2682 true Scaffold9458: 1-2682 Capsella grandiflora
Cagra.9458s0001 1.0kb upstream 1.0kb upstream 33 false Scaffold9458: 1-33 Capsella grandiflora
Cagra.9458s0001 1.0kb downstream 1.0kb downstream 3649 true Scaffold9458: 34-3682 Capsella grandiflora
Cagra.9458s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold9458: 2683-3682 Capsella grandiflora
Cagra.9458s0001 2.0kb upstream 2.0kb upstream 2682 true Scaffold9458: 1-2682 Capsella grandiflora
Cagra.9458s0001 2.0kb upstream 2.0kb upstream 33 false Scaffold9458: 1-33 Capsella grandiflora
Cagra.9458s0001 2.0kb downstream 2.0kb downstream 4649 true Scaffold9458: 34-4682 Capsella grandiflora
Cagra.9458s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold9458: 2683-4682 Capsella grandiflora
Cagra.9458s0001 5.0kb upstream 5.0kb upstream 2682 true Scaffold9458: 1-2682 Capsella grandiflora
Cagra.9458s0001 5.0kb upstream 5.0kb upstream 33 false Scaffold9458: 1-33 Capsella grandiflora
Cagra.9458s0001 5.0kb downstream 5.0kb downstream 7649 true Scaffold9458: 34-7682 Capsella grandiflora
Cagra.9458s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold9458: 2683-7682 Capsella grandiflora
Cagra.9458s0001 10.0kb upstream 10.0kb upstream 2682 true Scaffold9458: 1-2682 Capsella grandiflora
Cagra.9458s0001 10.0kb upstream 10.0kb upstream 33 false Scaffold9458: 1-33 Capsella grandiflora
Cagra.9458s0001 10.0kb downstream 10.0kb downstream 8508 true Scaffold9458: 34-8541 Capsella grandiflora
Cagra.9458s0001 10.0kb downstream 10.0kb downstream 5859 false Scaffold9458: 2683-8541 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361374 5261 Brassicaceae View MSA
123798147 5264 Brassicales-Malvales View MSA
124295822 5266 SBM View MSA
124247801 5268 Malvidae View MSA
124071917 5270 Rosid View MSA
123746480 5271 Pentapetalae View MSA
122788941 5272 Eudicot View MSA
122049902 5273 Angiosperm View MSA
121347954 5274 Embryophyte View MSA
123428722 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain