Gene : Cagra.9490s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11489 - 40S RIBOSOMAL PROTEIN SA Genomic Order:  6
Name:  ? Cagra.9490s0006 Secondary Identifier:  ? PAC:28914401
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9490s0006 0.5kb upstream 0.5kb upstream 2276 true Scaffold9490: 24735-27010 Capsella grandiflora
Cagra.9490s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold9490: 26511-27010 Capsella grandiflora
Cagra.9490s0006 0.5kb downstream 0.5kb downstream 2276 true Scaffold9490: 24235-26510 Capsella grandiflora
Cagra.9490s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold9490: 24235-24734 Capsella grandiflora
Cagra.9490s0006 1.0kb upstream 1.0kb upstream 2776 true Scaffold9490: 24735-27510 Capsella grandiflora
Cagra.9490s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold9490: 26511-27510 Capsella grandiflora
Cagra.9490s0006 1.0kb downstream 1.0kb downstream 2776 true Scaffold9490: 23735-26510 Capsella grandiflora
Cagra.9490s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold9490: 23735-24734 Capsella grandiflora
Cagra.9490s0006 2.0kb upstream 2.0kb upstream 3776 true Scaffold9490: 24735-28510 Capsella grandiflora
Cagra.9490s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold9490: 26511-28510 Capsella grandiflora
Cagra.9490s0006 2.0kb downstream 2.0kb downstream 3776 true Scaffold9490: 22735-26510 Capsella grandiflora
Cagra.9490s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold9490: 22735-24734 Capsella grandiflora
Cagra.9490s0006 5.0kb upstream 5.0kb upstream 6776 true Scaffold9490: 24735-31510 Capsella grandiflora
Cagra.9490s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold9490: 26511-31510 Capsella grandiflora
Cagra.9490s0006 5.0kb downstream 5.0kb downstream 6776 true Scaffold9490: 19735-26510 Capsella grandiflora
Cagra.9490s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold9490: 19735-24734 Capsella grandiflora
Cagra.9490s0006 10.0kb upstream 10.0kb upstream 11776 true Scaffold9490: 24735-36510 Capsella grandiflora
Cagra.9490s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold9490: 26511-36510 Capsella grandiflora
Cagra.9490s0006 10.0kb downstream 10.0kb downstream 11776 true Scaffold9490: 14735-26510 Capsella grandiflora
Cagra.9490s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold9490: 14735-24734 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381060 5261 Brassicaceae View MSA
123829633 5264 Brassicales-Malvales View MSA
124337080 5266 SBM View MSA
124251784 5268 Malvidae View MSA
124069184 5270 Rosid View MSA
123743040 5271 Pentapetalae View MSA
122796033 5272 Eudicot View MSA
122048402 5273 Angiosperm View MSA
121346031 5274 Embryophyte View MSA
123424876 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain