Gene : Cagra.9490s0015 C. grandiflora v1.1
Defline:  (1 of 10) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  15
Name:  ? Cagra.9490s0015 Secondary Identifier:  ? PAC:28914420
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9490s0015 0.5kb upstream 0.5kb upstream 2063 true Scaffold9490: 55921-57983 Capsella grandiflora
Cagra.9490s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold9490: 57484-57983 Capsella grandiflora
Cagra.9490s0015 0.5kb downstream 0.5kb downstream 2063 true Scaffold9490: 55421-57483 Capsella grandiflora
Cagra.9490s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold9490: 55421-55920 Capsella grandiflora
Cagra.9490s0015 1.0kb upstream 1.0kb upstream 2563 true Scaffold9490: 55921-58483 Capsella grandiflora
Cagra.9490s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold9490: 57484-58483 Capsella grandiflora
Cagra.9490s0015 1.0kb downstream 1.0kb downstream 2563 true Scaffold9490: 54921-57483 Capsella grandiflora
Cagra.9490s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold9490: 54921-55920 Capsella grandiflora
Cagra.9490s0015 2.0kb upstream 2.0kb upstream 3563 true Scaffold9490: 55921-59483 Capsella grandiflora
Cagra.9490s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold9490: 57484-59483 Capsella grandiflora
Cagra.9490s0015 2.0kb downstream 2.0kb downstream 3563 true Scaffold9490: 53921-57483 Capsella grandiflora
Cagra.9490s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold9490: 53921-55920 Capsella grandiflora
Cagra.9490s0015 5.0kb upstream 5.0kb upstream 6563 true Scaffold9490: 55921-62483 Capsella grandiflora
Cagra.9490s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold9490: 57484-62483 Capsella grandiflora
Cagra.9490s0015 5.0kb downstream 5.0kb downstream 6563 true Scaffold9490: 50921-57483 Capsella grandiflora
Cagra.9490s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold9490: 50921-55920 Capsella grandiflora
Cagra.9490s0015 10.0kb upstream 10.0kb upstream 11563 true Scaffold9490: 55921-67483 Capsella grandiflora
Cagra.9490s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold9490: 57484-67483 Capsella grandiflora
Cagra.9490s0015 10.0kb downstream 10.0kb downstream 11563 true Scaffold9490: 45921-57483 Capsella grandiflora
Cagra.9490s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold9490: 45921-55920 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368629 5261 Brassicaceae View MSA
123838433 5264 Brassicales-Malvales View MSA
124346422 5266 SBM View MSA
124253833 5268 Malvidae View MSA
124061811 5270 Rosid View MSA
123749881 5271 Pentapetalae View MSA
122794470 5272 Eudicot View MSA
122042584 5273 Angiosperm View MSA
121347178 5274 Embryophyte View MSA
123380504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain