Gene : Cagra.8874s0013 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23240//PTHR23240:SF9 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED Genomic Order:  13
Name:  ? Cagra.8874s0013 Secondary Identifier:  ? PAC:28901467
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8874s0013 0.5kb upstream 0.5kb upstream 2271 true Scaffold8874: 44015-46285 Capsella grandiflora
Cagra.8874s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold8874: 44015-44514 Capsella grandiflora
Cagra.8874s0013 0.5kb downstream 0.5kb downstream 2271 true Scaffold8874: 44515-46785 Capsella grandiflora
Cagra.8874s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold8874: 46286-46785 Capsella grandiflora
Cagra.8874s0013 1.0kb upstream 1.0kb upstream 2771 true Scaffold8874: 43515-46285 Capsella grandiflora
Cagra.8874s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold8874: 43515-44514 Capsella grandiflora
Cagra.8874s0013 1.0kb downstream 1.0kb downstream 2771 true Scaffold8874: 44515-47285 Capsella grandiflora
Cagra.8874s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold8874: 46286-47285 Capsella grandiflora
Cagra.8874s0013 2.0kb upstream 2.0kb upstream 3771 true Scaffold8874: 42515-46285 Capsella grandiflora
Cagra.8874s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold8874: 42515-44514 Capsella grandiflora
Cagra.8874s0013 2.0kb downstream 2.0kb downstream 3771 true Scaffold8874: 44515-48285 Capsella grandiflora
Cagra.8874s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold8874: 46286-48285 Capsella grandiflora
Cagra.8874s0013 5.0kb upstream 5.0kb upstream 6771 true Scaffold8874: 39515-46285 Capsella grandiflora
Cagra.8874s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold8874: 39515-44514 Capsella grandiflora
Cagra.8874s0013 5.0kb downstream 5.0kb downstream 3921 true Scaffold8874: 44515-48435 Capsella grandiflora
Cagra.8874s0013 5.0kb downstream 5.0kb downstream 2150 false Scaffold8874: 46286-48435 Capsella grandiflora
Cagra.8874s0013 10.0kb upstream 10.0kb upstream 11771 true Scaffold8874: 34515-46285 Capsella grandiflora
Cagra.8874s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold8874: 34515-44514 Capsella grandiflora
Cagra.8874s0013 10.0kb downstream 10.0kb downstream 3921 true Scaffold8874: 44515-48435 Capsella grandiflora
Cagra.8874s0013 10.0kb downstream 10.0kb downstream 2150 false Scaffold8874: 46286-48435 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371888 5261 Brassicaceae View MSA
123832661 5264 Brassicales-Malvales View MSA
124336401 5266 SBM View MSA
124243004 5268 Malvidae View MSA
124073622 5270 Rosid View MSA
123741645 5271 Pentapetalae View MSA
122793173 5272 Eudicot View MSA
122046861 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain