Gene : Cagra.8922s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  1
Name:  ? Cagra.8922s0001 Secondary Identifier:  ? PAC:28912172
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8922s0001 0.5kb upstream 0.5kb upstream 3166 true Scaffold8922: 2-3167 Capsella grandiflora
Cagra.8922s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold8922: 2668-3167 Capsella grandiflora
Cagra.8922s0001 0.5kb downstream 0.5kb downstream 2667 true Scaffold8922: 1-2667 Capsella grandiflora
Cagra.8922s0001 0.5kb downstream 0.5kb downstream 1 false Scaffold8922: 1-1 Capsella grandiflora
Cagra.8922s0001 1.0kb upstream 1.0kb upstream 3666 true Scaffold8922: 2-3667 Capsella grandiflora
Cagra.8922s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold8922: 2668-3667 Capsella grandiflora
Cagra.8922s0001 1.0kb downstream 1.0kb downstream 2667 true Scaffold8922: 1-2667 Capsella grandiflora
Cagra.8922s0001 1.0kb downstream 1.0kb downstream 1 false Scaffold8922: 1-1 Capsella grandiflora
Cagra.8922s0001 2.0kb upstream 2.0kb upstream 4666 true Scaffold8922: 2-4667 Capsella grandiflora
Cagra.8922s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold8922: 2668-4667 Capsella grandiflora
Cagra.8922s0001 2.0kb downstream 2.0kb downstream 2667 true Scaffold8922: 1-2667 Capsella grandiflora
Cagra.8922s0001 2.0kb downstream 2.0kb downstream 1 false Scaffold8922: 1-1 Capsella grandiflora
Cagra.8922s0001 5.0kb upstream 5.0kb upstream 7666 true Scaffold8922: 2-7667 Capsella grandiflora
Cagra.8922s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold8922: 2668-7667 Capsella grandiflora
Cagra.8922s0001 5.0kb downstream 5.0kb downstream 2667 true Scaffold8922: 1-2667 Capsella grandiflora
Cagra.8922s0001 5.0kb downstream 5.0kb downstream 1 false Scaffold8922: 1-1 Capsella grandiflora
Cagra.8922s0001 10.0kb upstream 10.0kb upstream 12666 true Scaffold8922: 2-12667 Capsella grandiflora
Cagra.8922s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold8922: 2668-12667 Capsella grandiflora
Cagra.8922s0001 10.0kb downstream 10.0kb downstream 2667 true Scaffold8922: 1-2667 Capsella grandiflora
Cagra.8922s0001 10.0kb downstream 10.0kb downstream 1 false Scaffold8922: 1-1 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026363 5273 Angiosperm View MSA
122375880 5261 Brassicaceae View MSA
123828042 5264 Brassicales-Malvales View MSA
124344212 5266 SBM View MSA
124246245 5268 Malvidae View MSA
124065012 5270 Rosid View MSA
123740689 5271 Pentapetalae View MSA
122788659 5272 Eudicot View MSA
121349199 5274 Embryophyte View MSA
123381214 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain