Gene : Cagra.8874s0012 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11593 - 60S RIBOSOMAL PROTEIN L17 Genomic Order:  12
Name:  ? Cagra.8874s0012 Secondary Identifier:  ? PAC:28901464
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8874s0012 0.5kb upstream 0.5kb upstream 2316 true Scaffold8874: 42006-44321 Capsella grandiflora
Cagra.8874s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold8874: 42006-42505 Capsella grandiflora
Cagra.8874s0012 0.5kb downstream 0.5kb downstream 2316 true Scaffold8874: 42506-44821 Capsella grandiflora
Cagra.8874s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold8874: 44322-44821 Capsella grandiflora
Cagra.8874s0012 1.0kb upstream 1.0kb upstream 2816 true Scaffold8874: 41506-44321 Capsella grandiflora
Cagra.8874s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold8874: 41506-42505 Capsella grandiflora
Cagra.8874s0012 1.0kb downstream 1.0kb downstream 2816 true Scaffold8874: 42506-45321 Capsella grandiflora
Cagra.8874s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold8874: 44322-45321 Capsella grandiflora
Cagra.8874s0012 2.0kb upstream 2.0kb upstream 3816 true Scaffold8874: 40506-44321 Capsella grandiflora
Cagra.8874s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold8874: 40506-42505 Capsella grandiflora
Cagra.8874s0012 2.0kb downstream 2.0kb downstream 3816 true Scaffold8874: 42506-46321 Capsella grandiflora
Cagra.8874s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold8874: 44322-46321 Capsella grandiflora
Cagra.8874s0012 5.0kb upstream 5.0kb upstream 6816 true Scaffold8874: 37506-44321 Capsella grandiflora
Cagra.8874s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold8874: 37506-42505 Capsella grandiflora
Cagra.8874s0012 5.0kb downstream 5.0kb downstream 5930 true Scaffold8874: 42506-48435 Capsella grandiflora
Cagra.8874s0012 5.0kb downstream 5.0kb downstream 4114 false Scaffold8874: 44322-48435 Capsella grandiflora
Cagra.8874s0012 10.0kb upstream 10.0kb upstream 11816 true Scaffold8874: 32506-44321 Capsella grandiflora
Cagra.8874s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold8874: 32506-42505 Capsella grandiflora
Cagra.8874s0012 10.0kb downstream 10.0kb downstream 5930 true Scaffold8874: 42506-48435 Capsella grandiflora
Cagra.8874s0012 10.0kb downstream 10.0kb downstream 4114 false Scaffold8874: 44322-48435 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362766 5261 Brassicaceae View MSA
123838790 5264 Brassicales-Malvales View MSA
124345151 5266 SBM View MSA
124251108 5268 Malvidae View MSA
124061649 5270 Rosid View MSA
123752995 5271 Pentapetalae View MSA
122790046 5272 Eudicot View MSA
122051496 5273 Angiosperm View MSA
121350050 5274 Embryophyte View MSA
123424396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain