Gene : Cagra.8966s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10168//PTHR10168:SF104 - GLUTAREDOXIN Genomic Order:  3
Name:  ? Cagra.8966s0003 Secondary Identifier:  ? PAC:28919969
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora THIOREDOX-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8966s0003 0.5kb upstream 0.5kb upstream 2241 true Scaffold8966: 7939-10179 Capsella grandiflora
Cagra.8966s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold8966: 9680-10179 Capsella grandiflora
Cagra.8966s0003 0.5kb downstream 0.5kb downstream 2241 true Scaffold8966: 7439-9679 Capsella grandiflora
Cagra.8966s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold8966: 7439-7938 Capsella grandiflora
Cagra.8966s0003 1.0kb upstream 1.0kb upstream 2741 true Scaffold8966: 7939-10679 Capsella grandiflora
Cagra.8966s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold8966: 9680-10679 Capsella grandiflora
Cagra.8966s0003 1.0kb downstream 1.0kb downstream 2741 true Scaffold8966: 6939-9679 Capsella grandiflora
Cagra.8966s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold8966: 6939-7938 Capsella grandiflora
Cagra.8966s0003 2.0kb upstream 2.0kb upstream 3741 true Scaffold8966: 7939-11679 Capsella grandiflora
Cagra.8966s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold8966: 9680-11679 Capsella grandiflora
Cagra.8966s0003 2.0kb downstream 2.0kb downstream 3741 true Scaffold8966: 5939-9679 Capsella grandiflora
Cagra.8966s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold8966: 5939-7938 Capsella grandiflora
Cagra.8966s0003 5.0kb upstream 5.0kb upstream 6741 true Scaffold8966: 7939-14679 Capsella grandiflora
Cagra.8966s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold8966: 9680-14679 Capsella grandiflora
Cagra.8966s0003 5.0kb downstream 5.0kb downstream 6741 true Scaffold8966: 2939-9679 Capsella grandiflora
Cagra.8966s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold8966: 2939-7938 Capsella grandiflora
Cagra.8966s0003 10.0kb upstream 10.0kb upstream 9786 true Scaffold8966: 7939-17724 Capsella grandiflora
Cagra.8966s0003 10.0kb upstream 10.0kb upstream 8045 false Scaffold8966: 9680-17724 Capsella grandiflora
Cagra.8966s0003 10.0kb downstream 10.0kb downstream 9679 true Scaffold8966: 1-9679 Capsella grandiflora
Cagra.8966s0003 10.0kb downstream 10.0kb downstream 7938 false Scaffold8966: 1-7938 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361670 5261 Brassicaceae View MSA
123833232 5264 Brassicales-Malvales View MSA
124346532 5266 SBM View MSA
124248160 5268 Malvidae View MSA
124065401 5270 Rosid View MSA
123746542 5271 Pentapetalae View MSA
122795168 5272 Eudicot View MSA
122042909 5273 Angiosperm View MSA
121349337 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain