Gene : Cagra.8967s0008 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  8
Name:  ? Cagra.8967s0008 Secondary Identifier:  ? PAC:28893821
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8967s0008 0.5kb upstream 0.5kb upstream 2590 true Scaffold8967: 26300-28889 Capsella grandiflora
Cagra.8967s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold8967: 28390-28889 Capsella grandiflora
Cagra.8967s0008 0.5kb downstream 0.5kb downstream 2590 true Scaffold8967: 25800-28389 Capsella grandiflora
Cagra.8967s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold8967: 25800-26299 Capsella grandiflora
Cagra.8967s0008 1.0kb upstream 1.0kb upstream 3090 true Scaffold8967: 26300-29389 Capsella grandiflora
Cagra.8967s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold8967: 28390-29389 Capsella grandiflora
Cagra.8967s0008 1.0kb downstream 1.0kb downstream 3090 true Scaffold8967: 25300-28389 Capsella grandiflora
Cagra.8967s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold8967: 25300-26299 Capsella grandiflora
Cagra.8967s0008 2.0kb upstream 2.0kb upstream 4090 true Scaffold8967: 26300-30389 Capsella grandiflora
Cagra.8967s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold8967: 28390-30389 Capsella grandiflora
Cagra.8967s0008 2.0kb downstream 2.0kb downstream 4090 true Scaffold8967: 24300-28389 Capsella grandiflora
Cagra.8967s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold8967: 24300-26299 Capsella grandiflora
Cagra.8967s0008 5.0kb upstream 5.0kb upstream 7090 true Scaffold8967: 26300-33389 Capsella grandiflora
Cagra.8967s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold8967: 28390-33389 Capsella grandiflora
Cagra.8967s0008 5.0kb downstream 5.0kb downstream 7090 true Scaffold8967: 21300-28389 Capsella grandiflora
Cagra.8967s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold8967: 21300-26299 Capsella grandiflora
Cagra.8967s0008 10.0kb upstream 10.0kb upstream 12090 true Scaffold8967: 26300-38389 Capsella grandiflora
Cagra.8967s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold8967: 28390-38389 Capsella grandiflora
Cagra.8967s0008 10.0kb downstream 10.0kb downstream 12090 true Scaffold8967: 16300-28389 Capsella grandiflora
Cagra.8967s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold8967: 16300-26299 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370210 5261 Brassicaceae View MSA
123833927 5264 Brassicales-Malvales View MSA
124339423 5266 SBM View MSA
124241200 5268 Malvidae View MSA
124062477 5270 Rosid View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain