Gene : Cagra.8996s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23041:SF65 - E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG Genomic Order:  4
Name:  ? Cagra.8996s0004 Secondary Identifier:  ? PAC:28920220
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8996s0004 0.5kb upstream 0.5kb upstream 3056 true Scaffold8996: 10281-13336 Capsella grandiflora
Cagra.8996s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold8996: 10281-10780 Capsella grandiflora
Cagra.8996s0004 0.5kb downstream 0.5kb downstream 3056 true Scaffold8996: 10781-13836 Capsella grandiflora
Cagra.8996s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold8996: 13337-13836 Capsella grandiflora
Cagra.8996s0004 1.0kb upstream 1.0kb upstream 3556 true Scaffold8996: 9781-13336 Capsella grandiflora
Cagra.8996s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold8996: 9781-10780 Capsella grandiflora
Cagra.8996s0004 1.0kb downstream 1.0kb downstream 3556 true Scaffold8996: 10781-14336 Capsella grandiflora
Cagra.8996s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold8996: 13337-14336 Capsella grandiflora
Cagra.8996s0004 2.0kb upstream 2.0kb upstream 4556 true Scaffold8996: 8781-13336 Capsella grandiflora
Cagra.8996s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold8996: 8781-10780 Capsella grandiflora
Cagra.8996s0004 2.0kb downstream 2.0kb downstream 4556 true Scaffold8996: 10781-15336 Capsella grandiflora
Cagra.8996s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold8996: 13337-15336 Capsella grandiflora
Cagra.8996s0004 5.0kb upstream 5.0kb upstream 7556 true Scaffold8996: 5781-13336 Capsella grandiflora
Cagra.8996s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold8996: 5781-10780 Capsella grandiflora
Cagra.8996s0004 5.0kb downstream 5.0kb downstream 7556 true Scaffold8996: 10781-18336 Capsella grandiflora
Cagra.8996s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold8996: 13337-18336 Capsella grandiflora
Cagra.8996s0004 10.0kb upstream 10.0kb upstream 12556 true Scaffold8996: 781-13336 Capsella grandiflora
Cagra.8996s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold8996: 781-10780 Capsella grandiflora
Cagra.8996s0004 10.0kb downstream 10.0kb downstream 12556 true Scaffold8996: 10781-23336 Capsella grandiflora
Cagra.8996s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold8996: 13337-23336 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374970 5261 Brassicaceae View MSA
123828578 5264 Brassicales-Malvales View MSA
124336858 5266 SBM View MSA
124243042 5268 Malvidae View MSA
124065183 5270 Rosid View MSA
123752158 5271 Pentapetalae View MSA
122786923 5272 Eudicot View MSA
122042121 5273 Angiosperm View MSA
121345385 5274 Embryophyte View MSA
123428682 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain