Gene : Cagra.8996s0018 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10774:SF80 - CALCIUM-DEPENDENT LIPID-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  18
Name:  ? Cagra.8996s0018 Secondary Identifier:  ? PAC:28920227
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8996s0018 0.5kb upstream 0.5kb upstream 4640 true Scaffold8996: 48570-53209 Capsella grandiflora
Cagra.8996s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold8996: 48570-49069 Capsella grandiflora
Cagra.8996s0018 0.5kb downstream 0.5kb downstream 4640 true Scaffold8996: 49070-53709 Capsella grandiflora
Cagra.8996s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold8996: 53210-53709 Capsella grandiflora
Cagra.8996s0018 1.0kb upstream 1.0kb upstream 5140 true Scaffold8996: 48070-53209 Capsella grandiflora
Cagra.8996s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold8996: 48070-49069 Capsella grandiflora
Cagra.8996s0018 1.0kb downstream 1.0kb downstream 5140 true Scaffold8996: 49070-54209 Capsella grandiflora
Cagra.8996s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold8996: 53210-54209 Capsella grandiflora
Cagra.8996s0018 2.0kb upstream 2.0kb upstream 6140 true Scaffold8996: 47070-53209 Capsella grandiflora
Cagra.8996s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold8996: 47070-49069 Capsella grandiflora
Cagra.8996s0018 2.0kb downstream 2.0kb downstream 6140 true Scaffold8996: 49070-55209 Capsella grandiflora
Cagra.8996s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold8996: 53210-55209 Capsella grandiflora
Cagra.8996s0018 5.0kb upstream 5.0kb upstream 9140 true Scaffold8996: 44070-53209 Capsella grandiflora
Cagra.8996s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold8996: 44070-49069 Capsella grandiflora
Cagra.8996s0018 5.0kb downstream 5.0kb downstream 9140 true Scaffold8996: 49070-58209 Capsella grandiflora
Cagra.8996s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold8996: 53210-58209 Capsella grandiflora
Cagra.8996s0018 10.0kb upstream 10.0kb upstream 14140 true Scaffold8996: 39070-53209 Capsella grandiflora
Cagra.8996s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold8996: 39070-49069 Capsella grandiflora
Cagra.8996s0018 10.0kb downstream 10.0kb downstream 9615 true Scaffold8996: 49070-58684 Capsella grandiflora
Cagra.8996s0018 10.0kb downstream 10.0kb downstream 5475 false Scaffold8996: 53210-58684 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378615 5261 Brassicaceae View MSA
123801933 5264 Brassicales-Malvales View MSA
124299180 5266 SBM View MSA
124247865 5268 Malvidae View MSA
124066710 5270 Rosid View MSA
123745986 5271 Pentapetalae View MSA
122787732 5272 Eudicot View MSA
122045584 5273 Angiosperm View MSA
121350253 5274 Embryophyte View MSA
123426647 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain