Gene : Cagra.9017s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR14110//PTHR14110:SF6 - MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 Genomic Order:  5
Name:  ? Cagra.9017s0005 Secondary Identifier:  ? PAC:28907076
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9017s0005 0.5kb upstream 0.5kb upstream 2390 true Scaffold9017: 13824-16213 Capsella grandiflora
Cagra.9017s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold9017: 13824-14323 Capsella grandiflora
Cagra.9017s0005 0.5kb downstream 0.5kb downstream 2390 true Scaffold9017: 14324-16713 Capsella grandiflora
Cagra.9017s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold9017: 16214-16713 Capsella grandiflora
Cagra.9017s0005 1.0kb upstream 1.0kb upstream 2890 true Scaffold9017: 13324-16213 Capsella grandiflora
Cagra.9017s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold9017: 13324-14323 Capsella grandiflora
Cagra.9017s0005 1.0kb downstream 1.0kb downstream 2890 true Scaffold9017: 14324-17213 Capsella grandiflora
Cagra.9017s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold9017: 16214-17213 Capsella grandiflora
Cagra.9017s0005 2.0kb upstream 2.0kb upstream 3890 true Scaffold9017: 12324-16213 Capsella grandiflora
Cagra.9017s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold9017: 12324-14323 Capsella grandiflora
Cagra.9017s0005 2.0kb downstream 2.0kb downstream 3890 true Scaffold9017: 14324-18213 Capsella grandiflora
Cagra.9017s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold9017: 16214-18213 Capsella grandiflora
Cagra.9017s0005 5.0kb upstream 5.0kb upstream 6890 true Scaffold9017: 9324-16213 Capsella grandiflora
Cagra.9017s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold9017: 9324-14323 Capsella grandiflora
Cagra.9017s0005 5.0kb downstream 5.0kb downstream 6890 true Scaffold9017: 14324-21213 Capsella grandiflora
Cagra.9017s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold9017: 16214-21213 Capsella grandiflora
Cagra.9017s0005 10.0kb upstream 10.0kb upstream 11890 true Scaffold9017: 4324-16213 Capsella grandiflora
Cagra.9017s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold9017: 4324-14323 Capsella grandiflora
Cagra.9017s0005 10.0kb downstream 10.0kb downstream 11890 true Scaffold9017: 14324-26213 Capsella grandiflora
Cagra.9017s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold9017: 16214-26213 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369804 5261 Brassicaceae View MSA
123831292 5264 Brassicales-Malvales View MSA
124345371 5266 SBM View MSA
124237676 5268 Malvidae View MSA
124063429 5270 Rosid View MSA
123741694 5271 Pentapetalae View MSA
122789967 5272 Eudicot View MSA
122045170 5273 Angiosperm View MSA
121345051 5274 Embryophyte View MSA
123428187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain