Gene : Cagra.9063s0002 C. grandiflora v1.1
Defline:  (1 of 3) PTHR22958 - RELATED TO MULTIFUNCTIONAL CYCLIN-DEPENDENT KINASE-RELATED Genomic Order:  2
Name:  ? Cagra.9063s0002 Secondary Identifier:  ? PAC:28901058
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7409 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9063s0002 0.5kb upstream 0.5kb upstream 2289 true Scaffold9063: 7225-9513 Capsella grandiflora
Cagra.9063s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold9063: 9014-9513 Capsella grandiflora
Cagra.9063s0002 0.5kb downstream 0.5kb downstream 2289 true Scaffold9063: 6725-9013 Capsella grandiflora
Cagra.9063s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold9063: 6725-7224 Capsella grandiflora
Cagra.9063s0002 1.0kb upstream 1.0kb upstream 2789 true Scaffold9063: 7225-10013 Capsella grandiflora
Cagra.9063s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold9063: 9014-10013 Capsella grandiflora
Cagra.9063s0002 1.0kb downstream 1.0kb downstream 2789 true Scaffold9063: 6225-9013 Capsella grandiflora
Cagra.9063s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold9063: 6225-7224 Capsella grandiflora
Cagra.9063s0002 2.0kb upstream 2.0kb upstream 3789 true Scaffold9063: 7225-11013 Capsella grandiflora
Cagra.9063s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold9063: 9014-11013 Capsella grandiflora
Cagra.9063s0002 2.0kb downstream 2.0kb downstream 3789 true Scaffold9063: 5225-9013 Capsella grandiflora
Cagra.9063s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold9063: 5225-7224 Capsella grandiflora
Cagra.9063s0002 5.0kb upstream 5.0kb upstream 6789 true Scaffold9063: 7225-14013 Capsella grandiflora
Cagra.9063s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold9063: 9014-14013 Capsella grandiflora
Cagra.9063s0002 5.0kb downstream 5.0kb downstream 6789 true Scaffold9063: 2225-9013 Capsella grandiflora
Cagra.9063s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold9063: 2225-7224 Capsella grandiflora
Cagra.9063s0002 10.0kb upstream 10.0kb upstream 10166 true Scaffold9063: 7225-17390 Capsella grandiflora
Cagra.9063s0002 10.0kb upstream 10.0kb upstream 8377 false Scaffold9063: 9014-17390 Capsella grandiflora
Cagra.9063s0002 10.0kb downstream 10.0kb downstream 9013 true Scaffold9063: 1-9013 Capsella grandiflora
Cagra.9063s0002 10.0kb downstream 10.0kb downstream 7224 false Scaffold9063: 1-7224 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368694 5261 Brassicaceae View MSA
123799632 5264 Brassicales-Malvales View MSA
124346090 5266 SBM View MSA
124254090 5268 Malvidae View MSA
124051086 5270 Rosid View MSA
123747785 5271 Pentapetalae View MSA
122794114 5272 Eudicot View MSA
122041847 5273 Angiosperm View MSA
123429151 5275 Viridiplantae View MSA
121351088 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain