Gene : Cagra.9128s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31189:SF2 - CUPIN DOMAIN-CONTAINING PROTEIN Genomic Order:  6
Name:  ? Cagra.9128s0006 Secondary Identifier:  ? PAC:28909599
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9128s0006 0.5kb upstream 0.5kb upstream 2228 true Scaffold9128: 25436-27663 Capsella grandiflora
Cagra.9128s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold9128: 27164-27663 Capsella grandiflora
Cagra.9128s0006 0.5kb downstream 0.5kb downstream 2228 true Scaffold9128: 24936-27163 Capsella grandiflora
Cagra.9128s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold9128: 24936-25435 Capsella grandiflora
Cagra.9128s0006 1.0kb upstream 1.0kb upstream 2728 true Scaffold9128: 25436-28163 Capsella grandiflora
Cagra.9128s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold9128: 27164-28163 Capsella grandiflora
Cagra.9128s0006 1.0kb downstream 1.0kb downstream 2728 true Scaffold9128: 24436-27163 Capsella grandiflora
Cagra.9128s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold9128: 24436-25435 Capsella grandiflora
Cagra.9128s0006 2.0kb upstream 2.0kb upstream 3728 true Scaffold9128: 25436-29163 Capsella grandiflora
Cagra.9128s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold9128: 27164-29163 Capsella grandiflora
Cagra.9128s0006 2.0kb downstream 2.0kb downstream 3728 true Scaffold9128: 23436-27163 Capsella grandiflora
Cagra.9128s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold9128: 23436-25435 Capsella grandiflora
Cagra.9128s0006 5.0kb upstream 5.0kb upstream 6728 true Scaffold9128: 25436-32163 Capsella grandiflora
Cagra.9128s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold9128: 27164-32163 Capsella grandiflora
Cagra.9128s0006 5.0kb downstream 5.0kb downstream 6728 true Scaffold9128: 20436-27163 Capsella grandiflora
Cagra.9128s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold9128: 20436-25435 Capsella grandiflora
Cagra.9128s0006 10.0kb upstream 10.0kb upstream 11728 true Scaffold9128: 25436-37163 Capsella grandiflora
Cagra.9128s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold9128: 27164-37163 Capsella grandiflora
Cagra.9128s0006 10.0kb downstream 10.0kb downstream 11728 true Scaffold9128: 15436-27163 Capsella grandiflora
Cagra.9128s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold9128: 15436-25435 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372514 5261 Brassicaceae View MSA
123832835 5264 Brassicales-Malvales View MSA
124342856 5266 SBM View MSA
124239817 5268 Malvidae View MSA
124068702 5270 Rosid View MSA
123752379 5271 Pentapetalae View MSA
122792319 5272 Eudicot View MSA
122046827 5273 Angiosperm View MSA
121310665 5274 Embryophyte View MSA
123348093 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain