Gene : Cagra.9148s0001 C. grandiflora v1.1
Defline:  (1 of 14) PTHR11206:SF87 - MATE EFFLUX FAMILY PROTEIN-RELATED Genomic Order:  1
Name:  ? Cagra.9148s0001 Secondary Identifier:  ? PAC:28904020
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9148s0001 0.5kb upstream 0.5kb upstream 2429 true Scaffold9148: 13104-15532 Capsella grandiflora
Cagra.9148s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold9148: 13104-13603 Capsella grandiflora
Cagra.9148s0001 0.5kb downstream 0.5kb downstream 2429 true Scaffold9148: 13604-16032 Capsella grandiflora
Cagra.9148s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold9148: 15533-16032 Capsella grandiflora
Cagra.9148s0001 1.0kb upstream 1.0kb upstream 2929 true Scaffold9148: 12604-15532 Capsella grandiflora
Cagra.9148s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold9148: 12604-13603 Capsella grandiflora
Cagra.9148s0001 1.0kb downstream 1.0kb downstream 2929 true Scaffold9148: 13604-16532 Capsella grandiflora
Cagra.9148s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold9148: 15533-16532 Capsella grandiflora
Cagra.9148s0001 2.0kb upstream 2.0kb upstream 3929 true Scaffold9148: 11604-15532 Capsella grandiflora
Cagra.9148s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold9148: 11604-13603 Capsella grandiflora
Cagra.9148s0001 2.0kb downstream 2.0kb downstream 3929 true Scaffold9148: 13604-17532 Capsella grandiflora
Cagra.9148s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold9148: 15533-17532 Capsella grandiflora
Cagra.9148s0001 5.0kb upstream 5.0kb upstream 6929 true Scaffold9148: 8604-15532 Capsella grandiflora
Cagra.9148s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold9148: 8604-13603 Capsella grandiflora
Cagra.9148s0001 5.0kb downstream 5.0kb downstream 6929 true Scaffold9148: 13604-20532 Capsella grandiflora
Cagra.9148s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold9148: 15533-20532 Capsella grandiflora
Cagra.9148s0001 10.0kb upstream 10.0kb upstream 11929 true Scaffold9148: 3604-15532 Capsella grandiflora
Cagra.9148s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold9148: 3604-13603 Capsella grandiflora
Cagra.9148s0001 10.0kb downstream 10.0kb downstream 11929 true Scaffold9148: 13604-25532 Capsella grandiflora
Cagra.9148s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold9148: 15533-25532 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343219 5261 Brassicaceae View MSA
123783483 5264 Brassicales-Malvales View MSA
124281714 5266 SBM View MSA
124254486 5268 Malvidae View MSA
124070136 5270 Rosid View MSA
123747121 5271 Pentapetalae View MSA
122794225 5272 Eudicot View MSA
122042479 5273 Angiosperm View MSA
121350842 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain