Gene : Cagra.8568s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22939:SF67 - PROTEASE DO-LIKE 9 Genomic Order:  3
Name:  ? Cagra.8568s0003 Secondary Identifier:  ? PAC:28901577
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8568s0003 0.5kb upstream 0.5kb upstream 3514 true Scaffold8568: 12022-15535 Capsella grandiflora
Cagra.8568s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold8568: 15036-15535 Capsella grandiflora
Cagra.8568s0003 0.5kb downstream 0.5kb downstream 3514 true Scaffold8568: 11522-15035 Capsella grandiflora
Cagra.8568s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold8568: 11522-12021 Capsella grandiflora
Cagra.8568s0003 1.0kb upstream 1.0kb upstream 4014 true Scaffold8568: 12022-16035 Capsella grandiflora
Cagra.8568s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold8568: 15036-16035 Capsella grandiflora
Cagra.8568s0003 1.0kb downstream 1.0kb downstream 4014 true Scaffold8568: 11022-15035 Capsella grandiflora
Cagra.8568s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold8568: 11022-12021 Capsella grandiflora
Cagra.8568s0003 2.0kb upstream 2.0kb upstream 5014 true Scaffold8568: 12022-17035 Capsella grandiflora
Cagra.8568s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold8568: 15036-17035 Capsella grandiflora
Cagra.8568s0003 2.0kb downstream 2.0kb downstream 5014 true Scaffold8568: 10022-15035 Capsella grandiflora
Cagra.8568s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold8568: 10022-12021 Capsella grandiflora
Cagra.8568s0003 5.0kb upstream 5.0kb upstream 7349 true Scaffold8568: 12022-19370 Capsella grandiflora
Cagra.8568s0003 5.0kb upstream 5.0kb upstream 4335 false Scaffold8568: 15036-19370 Capsella grandiflora
Cagra.8568s0003 5.0kb downstream 5.0kb downstream 8014 true Scaffold8568: 7022-15035 Capsella grandiflora
Cagra.8568s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold8568: 7022-12021 Capsella grandiflora
Cagra.8568s0003 10.0kb upstream 10.0kb upstream 7349 true Scaffold8568: 12022-19370 Capsella grandiflora
Cagra.8568s0003 10.0kb upstream 10.0kb upstream 4335 false Scaffold8568: 15036-19370 Capsella grandiflora
Cagra.8568s0003 10.0kb downstream 10.0kb downstream 13014 true Scaffold8568: 2022-15035 Capsella grandiflora
Cagra.8568s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold8568: 2022-12021 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363287 5261 Brassicaceae View MSA
123830875 5264 Brassicales-Malvales View MSA
124342689 5266 SBM View MSA
124251646 5268 Malvidae View MSA
124072965 5270 Rosid View MSA
123741119 5271 Pentapetalae View MSA
122794115 5272 Eudicot View MSA
122046723 5273 Angiosperm View MSA
121346662 5274 Embryophyte View MSA
123426440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain