Gene : Cagra.8586s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33510:SF2 - PROTEIN TIC 20-IV, CHLOROPLASTIC Genomic Order:  3
Name:  ? Cagra.8586s0003 Secondary Identifier:  ? PAC:28913866
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8586s0003 0.5kb upstream 0.5kb upstream 2772 true Scaffold8586: 13284-16055 Capsella grandiflora
Cagra.8586s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold8586: 15556-16055 Capsella grandiflora
Cagra.8586s0003 0.5kb downstream 0.5kb downstream 2772 true Scaffold8586: 12784-15555 Capsella grandiflora
Cagra.8586s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold8586: 12784-13283 Capsella grandiflora
Cagra.8586s0003 1.0kb upstream 1.0kb upstream 3272 true Scaffold8586: 13284-16555 Capsella grandiflora
Cagra.8586s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold8586: 15556-16555 Capsella grandiflora
Cagra.8586s0003 1.0kb downstream 1.0kb downstream 3272 true Scaffold8586: 12284-15555 Capsella grandiflora
Cagra.8586s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold8586: 12284-13283 Capsella grandiflora
Cagra.8586s0003 2.0kb upstream 2.0kb upstream 4272 true Scaffold8586: 13284-17555 Capsella grandiflora
Cagra.8586s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold8586: 15556-17555 Capsella grandiflora
Cagra.8586s0003 2.0kb downstream 2.0kb downstream 4272 true Scaffold8586: 11284-15555 Capsella grandiflora
Cagra.8586s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold8586: 11284-13283 Capsella grandiflora
Cagra.8586s0003 5.0kb upstream 5.0kb upstream 7272 true Scaffold8586: 13284-20555 Capsella grandiflora
Cagra.8586s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold8586: 15556-20555 Capsella grandiflora
Cagra.8586s0003 5.0kb downstream 5.0kb downstream 7272 true Scaffold8586: 8284-15555 Capsella grandiflora
Cagra.8586s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold8586: 8284-13283 Capsella grandiflora
Cagra.8586s0003 10.0kb upstream 10.0kb upstream 9720 true Scaffold8586: 13284-23003 Capsella grandiflora
Cagra.8586s0003 10.0kb upstream 10.0kb upstream 7448 false Scaffold8586: 15556-23003 Capsella grandiflora
Cagra.8586s0003 10.0kb downstream 10.0kb downstream 12272 true Scaffold8586: 3284-15555 Capsella grandiflora
Cagra.8586s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold8586: 3284-13283 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360740 5261 Brassicaceae View MSA
123838750 5264 Brassicales-Malvales View MSA
124343434 5266 SBM View MSA
124252914 5268 Malvidae View MSA
124062125 5270 Rosid View MSA
123738974 5271 Pentapetalae View MSA
122790107 5272 Eudicot View MSA
122051187 5273 Angiosperm View MSA
121344668 5274 Embryophyte View MSA
123427529 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain