Gene : Cagra.8630s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31580:SF4 - FILAMENT-LIKE PLANT PROTEIN 4-RELATED Genomic Order:  1
Name:  ? Cagra.8630s0001 Secondary Identifier:  ? PAC:28915041
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8630s0001 0.5kb upstream 0.5kb upstream 4789 true Scaffold8630: 5081-9869 Capsella grandiflora
Cagra.8630s0001 0.5kb upstream 0.5kb upstream 199 false Scaffold8630: 9671-9869 Capsella grandiflora
Cagra.8630s0001 0.5kb downstream 0.5kb downstream 5090 true Scaffold8630: 4581-9670 Capsella grandiflora
Cagra.8630s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold8630: 4581-5080 Capsella grandiflora
Cagra.8630s0001 1.0kb upstream 1.0kb upstream 4789 true Scaffold8630: 5081-9869 Capsella grandiflora
Cagra.8630s0001 1.0kb upstream 1.0kb upstream 199 false Scaffold8630: 9671-9869 Capsella grandiflora
Cagra.8630s0001 1.0kb downstream 1.0kb downstream 5590 true Scaffold8630: 4081-9670 Capsella grandiflora
Cagra.8630s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold8630: 4081-5080 Capsella grandiflora
Cagra.8630s0001 2.0kb upstream 2.0kb upstream 4789 true Scaffold8630: 5081-9869 Capsella grandiflora
Cagra.8630s0001 2.0kb upstream 2.0kb upstream 199 false Scaffold8630: 9671-9869 Capsella grandiflora
Cagra.8630s0001 2.0kb downstream 2.0kb downstream 6590 true Scaffold8630: 3081-9670 Capsella grandiflora
Cagra.8630s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold8630: 3081-5080 Capsella grandiflora
Cagra.8630s0001 5.0kb upstream 5.0kb upstream 4789 true Scaffold8630: 5081-9869 Capsella grandiflora
Cagra.8630s0001 5.0kb upstream 5.0kb upstream 199 false Scaffold8630: 9671-9869 Capsella grandiflora
Cagra.8630s0001 5.0kb downstream 5.0kb downstream 9590 true Scaffold8630: 81-9670 Capsella grandiflora
Cagra.8630s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold8630: 81-5080 Capsella grandiflora
Cagra.8630s0001 10.0kb upstream 10.0kb upstream 4789 true Scaffold8630: 5081-9869 Capsella grandiflora
Cagra.8630s0001 10.0kb upstream 10.0kb upstream 199 false Scaffold8630: 9671-9869 Capsella grandiflora
Cagra.8630s0001 10.0kb downstream 10.0kb downstream 9670 true Scaffold8630: 1-9670 Capsella grandiflora
Cagra.8630s0001 10.0kb downstream 10.0kb downstream 5080 false Scaffold8630: 1-5080 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373241 5261 Brassicaceae View MSA
123841089 5264 Brassicales-Malvales View MSA
124343688 5266 SBM View MSA
124252265 5268 Malvidae View MSA
124071208 5270 Rosid View MSA
123744049 5271 Pentapetalae View MSA
122790238 5272 Eudicot View MSA
122044251 5273 Angiosperm View MSA
121351576 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain