Gene : Cagra.8586s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR13166:SF7 - LYR MOTIF-CONTAINING PROTEIN 4 Genomic Order:  4
Name:  ? Cagra.8586s0004 Secondary Identifier:  ? PAC:28913869
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8586s0004 0.5kb upstream 0.5kb upstream 1511 true Scaffold8586: 16954-18464 Capsella grandiflora
Cagra.8586s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold8586: 17965-18464 Capsella grandiflora
Cagra.8586s0004 0.5kb downstream 0.5kb downstream 1511 true Scaffold8586: 16454-17964 Capsella grandiflora
Cagra.8586s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold8586: 16454-16953 Capsella grandiflora
Cagra.8586s0004 1.0kb upstream 1.0kb upstream 2011 true Scaffold8586: 16954-18964 Capsella grandiflora
Cagra.8586s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold8586: 17965-18964 Capsella grandiflora
Cagra.8586s0004 1.0kb downstream 1.0kb downstream 2011 true Scaffold8586: 15954-17964 Capsella grandiflora
Cagra.8586s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold8586: 15954-16953 Capsella grandiflora
Cagra.8586s0004 2.0kb upstream 2.0kb upstream 3011 true Scaffold8586: 16954-19964 Capsella grandiflora
Cagra.8586s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold8586: 17965-19964 Capsella grandiflora
Cagra.8586s0004 2.0kb downstream 2.0kb downstream 3011 true Scaffold8586: 14954-17964 Capsella grandiflora
Cagra.8586s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold8586: 14954-16953 Capsella grandiflora
Cagra.8586s0004 5.0kb upstream 5.0kb upstream 6011 true Scaffold8586: 16954-22964 Capsella grandiflora
Cagra.8586s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold8586: 17965-22964 Capsella grandiflora
Cagra.8586s0004 5.0kb downstream 5.0kb downstream 6011 true Scaffold8586: 11954-17964 Capsella grandiflora
Cagra.8586s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold8586: 11954-16953 Capsella grandiflora
Cagra.8586s0004 10.0kb upstream 10.0kb upstream 6050 true Scaffold8586: 16954-23003 Capsella grandiflora
Cagra.8586s0004 10.0kb upstream 10.0kb upstream 5039 false Scaffold8586: 17965-23003 Capsella grandiflora
Cagra.8586s0004 10.0kb downstream 10.0kb downstream 11011 true Scaffold8586: 6954-17964 Capsella grandiflora
Cagra.8586s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold8586: 6954-16953 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334422 5261 Brassicaceae Singleton cluster - no MSA
123775258 5264 Brassicales-Malvales Singleton cluster - no MSA
124273670 5266 SBM Singleton cluster - no MSA
124129245 5268 Malvidae Singleton cluster - no MSA
123857819 5270 Rosid Singleton cluster - no MSA
123753120 5271 Pentapetalae View MSA
122790951 5272 Eudicot View MSA
122044575 5273 Angiosperm View MSA
121346889 5274 Embryophyte View MSA
123426954 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain