Gene : Cagra.8766s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11815 - SUCCINYL-COA SYNTHETASE BETA CHAIN Genomic Order:  4
Name:  ? Cagra.8766s0004 Secondary Identifier:  ? PAC:28899334
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5464 Capsella grandiflora pathologic  
Cgrandiflora PWY-5690 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8766s0004 0.5kb upstream 0.5kb upstream 2496 true Scaffold8766: 10209-12704 Capsella grandiflora
Cagra.8766s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold8766: 10209-10708 Capsella grandiflora
Cagra.8766s0004 0.5kb downstream 0.5kb downstream 2496 true Scaffold8766: 10709-13204 Capsella grandiflora
Cagra.8766s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold8766: 12705-13204 Capsella grandiflora
Cagra.8766s0004 1.0kb upstream 1.0kb upstream 2996 true Scaffold8766: 9709-12704 Capsella grandiflora
Cagra.8766s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold8766: 9709-10708 Capsella grandiflora
Cagra.8766s0004 1.0kb downstream 1.0kb downstream 2996 true Scaffold8766: 10709-13704 Capsella grandiflora
Cagra.8766s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold8766: 12705-13704 Capsella grandiflora
Cagra.8766s0004 2.0kb upstream 2.0kb upstream 3996 true Scaffold8766: 8709-12704 Capsella grandiflora
Cagra.8766s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold8766: 8709-10708 Capsella grandiflora
Cagra.8766s0004 2.0kb downstream 2.0kb downstream 3996 true Scaffold8766: 10709-14704 Capsella grandiflora
Cagra.8766s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold8766: 12705-14704 Capsella grandiflora
Cagra.8766s0004 5.0kb upstream 5.0kb upstream 6996 true Scaffold8766: 5709-12704 Capsella grandiflora
Cagra.8766s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold8766: 5709-10708 Capsella grandiflora
Cagra.8766s0004 5.0kb downstream 5.0kb downstream 6996 true Scaffold8766: 10709-17704 Capsella grandiflora
Cagra.8766s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold8766: 12705-17704 Capsella grandiflora
Cagra.8766s0004 10.0kb upstream 10.0kb upstream 11996 true Scaffold8766: 709-12704 Capsella grandiflora
Cagra.8766s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold8766: 709-10708 Capsella grandiflora
Cagra.8766s0004 10.0kb downstream 10.0kb downstream 11996 true Scaffold8766: 10709-22704 Capsella grandiflora
Cagra.8766s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold8766: 12705-22704 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368823 5261 Brassicaceae View MSA
123831519 5264 Brassicales-Malvales View MSA
124339342 5266 SBM View MSA
124251399 5268 Malvidae View MSA
124060872 5270 Rosid View MSA
123742087 5271 Pentapetalae View MSA
122792279 5272 Eudicot View MSA
122051444 5273 Angiosperm View MSA
121345383 5274 Embryophyte View MSA
123424499 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain