Gene : Cagra.8193s0004 C. grandiflora v1.1
Defline:  (1 of 3) PTHR24362:SF255 - SERINE/THREONINE-PROTEIN KINASE NEK1 Genomic Order:  4
Name:  ? Cagra.8193s0004 Secondary Identifier:  ? PAC:28895502
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8193s0004 0.5kb upstream 0.5kb upstream 4650 true Scaffold8193: 20998-25647 Capsella grandiflora
Cagra.8193s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold8193: 25148-25647 Capsella grandiflora
Cagra.8193s0004 0.5kb downstream 0.5kb downstream 4650 true Scaffold8193: 20498-25147 Capsella grandiflora
Cagra.8193s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold8193: 20498-20997 Capsella grandiflora
Cagra.8193s0004 1.0kb upstream 1.0kb upstream 5150 true Scaffold8193: 20998-26147 Capsella grandiflora
Cagra.8193s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold8193: 25148-26147 Capsella grandiflora
Cagra.8193s0004 1.0kb downstream 1.0kb downstream 5150 true Scaffold8193: 19998-25147 Capsella grandiflora
Cagra.8193s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold8193: 19998-20997 Capsella grandiflora
Cagra.8193s0004 2.0kb upstream 2.0kb upstream 6150 true Scaffold8193: 20998-27147 Capsella grandiflora
Cagra.8193s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold8193: 25148-27147 Capsella grandiflora
Cagra.8193s0004 2.0kb downstream 2.0kb downstream 6150 true Scaffold8193: 18998-25147 Capsella grandiflora
Cagra.8193s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold8193: 18998-20997 Capsella grandiflora
Cagra.8193s0004 5.0kb upstream 5.0kb upstream 8742 true Scaffold8193: 20998-29739 Capsella grandiflora
Cagra.8193s0004 5.0kb upstream 5.0kb upstream 4592 false Scaffold8193: 25148-29739 Capsella grandiflora
Cagra.8193s0004 5.0kb downstream 5.0kb downstream 9150 true Scaffold8193: 15998-25147 Capsella grandiflora
Cagra.8193s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold8193: 15998-20997 Capsella grandiflora
Cagra.8193s0004 10.0kb upstream 10.0kb upstream 8742 true Scaffold8193: 20998-29739 Capsella grandiflora
Cagra.8193s0004 10.0kb upstream 10.0kb upstream 4592 false Scaffold8193: 25148-29739 Capsella grandiflora
Cagra.8193s0004 10.0kb downstream 10.0kb downstream 14150 true Scaffold8193: 10998-25147 Capsella grandiflora
Cagra.8193s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold8193: 10998-20997 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343501 5261 Brassicaceae View MSA
123841661 5264 Brassicales-Malvales View MSA
124342661 5266 SBM View MSA
124247909 5268 Malvidae View MSA
124070127 5270 Rosid View MSA
123743821 5271 Pentapetalae View MSA
122789481 5272 Eudicot View MSA
122043022 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310065 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain