Gene : Cagra.8209s0004 C. grandiflora v1.1
Defline:  (1 of 6) PTHR12505 - PHD FINGER TRANSCRIPTION FACTOR Genomic Order:  4
Name:  ? Cagra.8209s0004 Secondary Identifier:  ? PAC:28893689
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8209s0004 0.5kb upstream 0.5kb upstream 3284 true Scaffold8209: 6955-10238 Capsella grandiflora
Cagra.8209s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold8209: 6955-7454 Capsella grandiflora
Cagra.8209s0004 0.5kb downstream 0.5kb downstream 3284 true Scaffold8209: 7455-10738 Capsella grandiflora
Cagra.8209s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold8209: 10239-10738 Capsella grandiflora
Cagra.8209s0004 1.0kb upstream 1.0kb upstream 3784 true Scaffold8209: 6455-10238 Capsella grandiflora
Cagra.8209s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold8209: 6455-7454 Capsella grandiflora
Cagra.8209s0004 1.0kb downstream 1.0kb downstream 3784 true Scaffold8209: 7455-11238 Capsella grandiflora
Cagra.8209s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold8209: 10239-11238 Capsella grandiflora
Cagra.8209s0004 2.0kb upstream 2.0kb upstream 4784 true Scaffold8209: 5455-10238 Capsella grandiflora
Cagra.8209s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold8209: 5455-7454 Capsella grandiflora
Cagra.8209s0004 2.0kb downstream 2.0kb downstream 4784 true Scaffold8209: 7455-12238 Capsella grandiflora
Cagra.8209s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold8209: 10239-12238 Capsella grandiflora
Cagra.8209s0004 5.0kb upstream 5.0kb upstream 7784 true Scaffold8209: 2455-10238 Capsella grandiflora
Cagra.8209s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold8209: 2455-7454 Capsella grandiflora
Cagra.8209s0004 5.0kb downstream 5.0kb downstream 7784 true Scaffold8209: 7455-15238 Capsella grandiflora
Cagra.8209s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold8209: 10239-15238 Capsella grandiflora
Cagra.8209s0004 10.0kb upstream 10.0kb upstream 10238 true Scaffold8209: 1-10238 Capsella grandiflora
Cagra.8209s0004 10.0kb upstream 10.0kb upstream 7454 false Scaffold8209: 1-7454 Capsella grandiflora
Cagra.8209s0004 10.0kb downstream 10.0kb downstream 12784 true Scaffold8209: 7455-20238 Capsella grandiflora
Cagra.8209s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold8209: 10239-20238 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364748 5261 Brassicaceae View MSA
123828889 5264 Brassicales-Malvales View MSA
124339809 5266 SBM View MSA
124252964 5268 Malvidae View MSA
124072385 5270 Rosid View MSA
123748296 5271 Pentapetalae View MSA
122786870 5272 Eudicot View MSA
122051336 5273 Angiosperm View MSA
121351266 5274 Embryophyte View MSA
123426883 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain