Gene : Cagra.8219s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12694:SF8 - TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1 Genomic Order:  1
Name:  ? Cagra.8219s0001 Secondary Identifier:  ? PAC:28908285
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8219s0001 0.5kb upstream 0.5kb upstream 2277 true Scaffold8219: 3-2279 Capsella grandiflora
Cagra.8219s0001 0.5kb upstream 0.5kb upstream 2 false Scaffold8219: 2278-2279 Capsella grandiflora
Cagra.8219s0001 0.5kb downstream 0.5kb downstream 2277 true Scaffold8219: 1-2277 Capsella grandiflora
Cagra.8219s0001 0.5kb downstream 0.5kb downstream 2 false Scaffold8219: 1-2 Capsella grandiflora
Cagra.8219s0001 1.0kb upstream 1.0kb upstream 2277 true Scaffold8219: 3-2279 Capsella grandiflora
Cagra.8219s0001 1.0kb upstream 1.0kb upstream 2 false Scaffold8219: 2278-2279 Capsella grandiflora
Cagra.8219s0001 1.0kb downstream 1.0kb downstream 2277 true Scaffold8219: 1-2277 Capsella grandiflora
Cagra.8219s0001 1.0kb downstream 1.0kb downstream 2 false Scaffold8219: 1-2 Capsella grandiflora
Cagra.8219s0001 2.0kb upstream 2.0kb upstream 2277 true Scaffold8219: 3-2279 Capsella grandiflora
Cagra.8219s0001 2.0kb upstream 2.0kb upstream 2 false Scaffold8219: 2278-2279 Capsella grandiflora
Cagra.8219s0001 2.0kb downstream 2.0kb downstream 2277 true Scaffold8219: 1-2277 Capsella grandiflora
Cagra.8219s0001 2.0kb downstream 2.0kb downstream 2 false Scaffold8219: 1-2 Capsella grandiflora
Cagra.8219s0001 5.0kb upstream 5.0kb upstream 2277 true Scaffold8219: 3-2279 Capsella grandiflora
Cagra.8219s0001 5.0kb upstream 5.0kb upstream 2 false Scaffold8219: 2278-2279 Capsella grandiflora
Cagra.8219s0001 5.0kb downstream 5.0kb downstream 2277 true Scaffold8219: 1-2277 Capsella grandiflora
Cagra.8219s0001 5.0kb downstream 5.0kb downstream 2 false Scaffold8219: 1-2 Capsella grandiflora
Cagra.8219s0001 10.0kb upstream 10.0kb upstream 2277 true Scaffold8219: 3-2279 Capsella grandiflora
Cagra.8219s0001 10.0kb upstream 10.0kb upstream 2 false Scaffold8219: 2278-2279 Capsella grandiflora
Cagra.8219s0001 10.0kb downstream 10.0kb downstream 2277 true Scaffold8219: 1-2277 Capsella grandiflora
Cagra.8219s0001 10.0kb downstream 10.0kb downstream 2 false Scaffold8219: 1-2 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378750 5261 Brassicaceae View MSA
123837405 5264 Brassicales-Malvales View MSA
124339227 5266 SBM View MSA
124238901 5268 Malvidae View MSA
124063579 5270 Rosid View MSA
123741700 5271 Pentapetalae View MSA
122797200 5272 Eudicot View MSA
122049718 5273 Angiosperm View MSA
121345222 5274 Embryophyte View MSA
123426505 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain