Gene : Cagra.8248s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21389 - P53 INDUCED PROTEIN Genomic Order:  1
Name:  ? Cagra.8248s0001 Secondary Identifier:  ? PAC:28901921
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8248s0001 0.5kb upstream 0.5kb upstream 2888 true Scaffold8248: 13-2900 Capsella grandiflora
Cagra.8248s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold8248: 2401-2900 Capsella grandiflora
Cagra.8248s0001 0.5kb downstream 0.5kb downstream 2400 true Scaffold8248: 1-2400 Capsella grandiflora
Cagra.8248s0001 0.5kb downstream 0.5kb downstream 12 false Scaffold8248: 1-12 Capsella grandiflora
Cagra.8248s0001 1.0kb upstream 1.0kb upstream 3388 true Scaffold8248: 13-3400 Capsella grandiflora
Cagra.8248s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold8248: 2401-3400 Capsella grandiflora
Cagra.8248s0001 1.0kb downstream 1.0kb downstream 2400 true Scaffold8248: 1-2400 Capsella grandiflora
Cagra.8248s0001 1.0kb downstream 1.0kb downstream 12 false Scaffold8248: 1-12 Capsella grandiflora
Cagra.8248s0001 2.0kb upstream 2.0kb upstream 4388 true Scaffold8248: 13-4400 Capsella grandiflora
Cagra.8248s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold8248: 2401-4400 Capsella grandiflora
Cagra.8248s0001 2.0kb downstream 2.0kb downstream 2400 true Scaffold8248: 1-2400 Capsella grandiflora
Cagra.8248s0001 2.0kb downstream 2.0kb downstream 12 false Scaffold8248: 1-12 Capsella grandiflora
Cagra.8248s0001 5.0kb upstream 5.0kb upstream 7388 true Scaffold8248: 13-7400 Capsella grandiflora
Cagra.8248s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold8248: 2401-7400 Capsella grandiflora
Cagra.8248s0001 5.0kb downstream 5.0kb downstream 2400 true Scaffold8248: 1-2400 Capsella grandiflora
Cagra.8248s0001 5.0kb downstream 5.0kb downstream 12 false Scaffold8248: 1-12 Capsella grandiflora
Cagra.8248s0001 10.0kb upstream 10.0kb upstream 12388 true Scaffold8248: 13-12400 Capsella grandiflora
Cagra.8248s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold8248: 2401-12400 Capsella grandiflora
Cagra.8248s0001 10.0kb downstream 10.0kb downstream 2400 true Scaffold8248: 1-2400 Capsella grandiflora
Cagra.8248s0001 10.0kb downstream 10.0kb downstream 12 false Scaffold8248: 1-12 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334371 5261 Brassicaceae Singleton cluster - no MSA
123775216 5264 Brassicales-Malvales Singleton cluster - no MSA
124273629 5266 SBM Singleton cluster - no MSA
124249957 5268 Malvidae View MSA
123952446 5270 Rosid View MSA
123747133 5271 Pentapetalae View MSA
122786672 5272 Eudicot View MSA
122041577 5273 Angiosperm View MSA
121347072 5274 Embryophyte View MSA
123425486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain