Gene : Cagra.8287s0012 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13035:SF0 - PROTEIN N-TERMINAL GLUTAMINE AMIDOHYDROLASE Genomic Order:  12
Name:  ? Cagra.8287s0012 Secondary Identifier:  ? PAC:28904271
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8287s0012 0.5kb upstream 0.5kb upstream 2454 true Scaffold8287: 55350-57803 Capsella grandiflora
Cagra.8287s0012 0.5kb upstream 0.5kb upstream 11 false Scaffold8287: 57793-57803 Capsella grandiflora
Cagra.8287s0012 0.5kb downstream 0.5kb downstream 2943 true Scaffold8287: 54850-57792 Capsella grandiflora
Cagra.8287s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold8287: 54850-55349 Capsella grandiflora
Cagra.8287s0012 1.0kb upstream 1.0kb upstream 2454 true Scaffold8287: 55350-57803 Capsella grandiflora
Cagra.8287s0012 1.0kb upstream 1.0kb upstream 11 false Scaffold8287: 57793-57803 Capsella grandiflora
Cagra.8287s0012 1.0kb downstream 1.0kb downstream 3443 true Scaffold8287: 54350-57792 Capsella grandiflora
Cagra.8287s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold8287: 54350-55349 Capsella grandiflora
Cagra.8287s0012 2.0kb upstream 2.0kb upstream 2454 true Scaffold8287: 55350-57803 Capsella grandiflora
Cagra.8287s0012 2.0kb upstream 2.0kb upstream 11 false Scaffold8287: 57793-57803 Capsella grandiflora
Cagra.8287s0012 2.0kb downstream 2.0kb downstream 4443 true Scaffold8287: 53350-57792 Capsella grandiflora
Cagra.8287s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold8287: 53350-55349 Capsella grandiflora
Cagra.8287s0012 5.0kb upstream 5.0kb upstream 2454 true Scaffold8287: 55350-57803 Capsella grandiflora
Cagra.8287s0012 5.0kb upstream 5.0kb upstream 11 false Scaffold8287: 57793-57803 Capsella grandiflora
Cagra.8287s0012 5.0kb downstream 5.0kb downstream 7443 true Scaffold8287: 50350-57792 Capsella grandiflora
Cagra.8287s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold8287: 50350-55349 Capsella grandiflora
Cagra.8287s0012 10.0kb upstream 10.0kb upstream 2454 true Scaffold8287: 55350-57803 Capsella grandiflora
Cagra.8287s0012 10.0kb upstream 10.0kb upstream 11 false Scaffold8287: 57793-57803 Capsella grandiflora
Cagra.8287s0012 10.0kb downstream 10.0kb downstream 12443 true Scaffold8287: 45350-57792 Capsella grandiflora
Cagra.8287s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold8287: 45350-55349 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365786 5261 Brassicaceae View MSA
123827532 5264 Brassicales-Malvales View MSA
124346535 5266 SBM View MSA
124239318 5268 Malvidae View MSA
124065131 5270 Rosid View MSA
123740111 5271 Pentapetalae View MSA
122785886 5272 Eudicot View MSA
122047116 5273 Angiosperm View MSA
121346421 5274 Embryophyte View MSA
123380380 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain