Gene : Cagra.8346s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22773:SF50 - NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5 Genomic Order:  2
Name:  ? Cagra.8346s0002 Secondary Identifier:  ? PAC:28904046
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3781 Capsella grandiflora pathologic  
Cgrandiflora PWY-4302 Capsella grandiflora pathologic  
Cgrandiflora PWY-5083 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8346s0002 0.5kb upstream 0.5kb upstream 2833 true Scaffold8346: 2707-5539 Capsella grandiflora
Cagra.8346s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold8346: 5040-5539 Capsella grandiflora
Cagra.8346s0002 0.5kb downstream 0.5kb downstream 2833 true Scaffold8346: 2207-5039 Capsella grandiflora
Cagra.8346s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold8346: 2207-2706 Capsella grandiflora
Cagra.8346s0002 1.0kb upstream 1.0kb upstream 3333 true Scaffold8346: 2707-6039 Capsella grandiflora
Cagra.8346s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold8346: 5040-6039 Capsella grandiflora
Cagra.8346s0002 1.0kb downstream 1.0kb downstream 3333 true Scaffold8346: 1707-5039 Capsella grandiflora
Cagra.8346s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold8346: 1707-2706 Capsella grandiflora
Cagra.8346s0002 2.0kb upstream 2.0kb upstream 4333 true Scaffold8346: 2707-7039 Capsella grandiflora
Cagra.8346s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold8346: 5040-7039 Capsella grandiflora
Cagra.8346s0002 2.0kb downstream 2.0kb downstream 4333 true Scaffold8346: 707-5039 Capsella grandiflora
Cagra.8346s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold8346: 707-2706 Capsella grandiflora
Cagra.8346s0002 5.0kb upstream 5.0kb upstream 7333 true Scaffold8346: 2707-10039 Capsella grandiflora
Cagra.8346s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold8346: 5040-10039 Capsella grandiflora
Cagra.8346s0002 5.0kb downstream 5.0kb downstream 5039 true Scaffold8346: 1-5039 Capsella grandiflora
Cagra.8346s0002 5.0kb downstream 5.0kb downstream 2706 false Scaffold8346: 1-2706 Capsella grandiflora
Cagra.8346s0002 10.0kb upstream 10.0kb upstream 12333 true Scaffold8346: 2707-15039 Capsella grandiflora
Cagra.8346s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold8346: 5040-15039 Capsella grandiflora
Cagra.8346s0002 10.0kb downstream 10.0kb downstream 5039 true Scaffold8346: 1-5039 Capsella grandiflora
Cagra.8346s0002 10.0kb downstream 10.0kb downstream 2706 false Scaffold8346: 1-2706 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343807 5261 Brassicaceae View MSA
123783904 5264 Brassicales-Malvales View MSA
124282111 5266 SBM View MSA
124249623 5268 Malvidae View MSA
124072992 5270 Rosid View MSA
123753255 5271 Pentapetalae View MSA
122797410 5272 Eudicot View MSA
122049707 5273 Angiosperm View MSA
121351606 5274 Embryophyte View MSA
123428700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain