Gene : Cagra.8372s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10909:SF332 - ISOVALERYL-COA DEHYDROGENASE, MITOCHONDRIAL Genomic Order:  2
Name:  ? Cagra.8372s0002 Secondary Identifier:  ? PAC:28916031
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora LEU-DEG2-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8372s0002 0.5kb upstream 0.5kb upstream 4121 true Scaffold8372: 4331-8451 Capsella grandiflora
Cagra.8372s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold8372: 7952-8451 Capsella grandiflora
Cagra.8372s0002 0.5kb downstream 0.5kb downstream 4121 true Scaffold8372: 3831-7951 Capsella grandiflora
Cagra.8372s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold8372: 3831-4330 Capsella grandiflora
Cagra.8372s0002 1.0kb upstream 1.0kb upstream 4621 true Scaffold8372: 4331-8951 Capsella grandiflora
Cagra.8372s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold8372: 7952-8951 Capsella grandiflora
Cagra.8372s0002 1.0kb downstream 1.0kb downstream 4621 true Scaffold8372: 3331-7951 Capsella grandiflora
Cagra.8372s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold8372: 3331-4330 Capsella grandiflora
Cagra.8372s0002 2.0kb upstream 2.0kb upstream 5621 true Scaffold8372: 4331-9951 Capsella grandiflora
Cagra.8372s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold8372: 7952-9951 Capsella grandiflora
Cagra.8372s0002 2.0kb downstream 2.0kb downstream 5621 true Scaffold8372: 2331-7951 Capsella grandiflora
Cagra.8372s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold8372: 2331-4330 Capsella grandiflora
Cagra.8372s0002 5.0kb upstream 5.0kb upstream 8621 true Scaffold8372: 4331-12951 Capsella grandiflora
Cagra.8372s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold8372: 7952-12951 Capsella grandiflora
Cagra.8372s0002 5.0kb downstream 5.0kb downstream 7951 true Scaffold8372: 1-7951 Capsella grandiflora
Cagra.8372s0002 5.0kb downstream 5.0kb downstream 4330 false Scaffold8372: 1-4330 Capsella grandiflora
Cagra.8372s0002 10.0kb upstream 10.0kb upstream 13621 true Scaffold8372: 4331-17951 Capsella grandiflora
Cagra.8372s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold8372: 7952-17951 Capsella grandiflora
Cagra.8372s0002 10.0kb downstream 10.0kb downstream 7951 true Scaffold8372: 1-7951 Capsella grandiflora
Cagra.8372s0002 10.0kb downstream 10.0kb downstream 4330 false Scaffold8372: 1-4330 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365670 5261 Brassicaceae View MSA
123831930 5264 Brassicales-Malvales View MSA
124345831 5266 SBM View MSA
124243449 5268 Malvidae View MSA
124064222 5270 Rosid View MSA
123745101 5271 Pentapetalae View MSA
122788646 5272 Eudicot View MSA
122042062 5273 Angiosperm View MSA
121346887 5274 Embryophyte View MSA
123427095 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain