Gene : Cagra.7993s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR17972 - NUCLEOLAR RNA-ASSOCIATED PROTEIN Genomic Order:  11
Name:  ? Cagra.7993s0011 Secondary Identifier:  ? PAC:28912241
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7993s0011 0.5kb upstream 0.5kb upstream 7065 true Scaffold7993: 54353-61417 Capsella grandiflora
Cagra.7993s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold7993: 54353-54852 Capsella grandiflora
Cagra.7993s0011 0.5kb downstream 0.5kb downstream 7065 true Scaffold7993: 54853-61917 Capsella grandiflora
Cagra.7993s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold7993: 61418-61917 Capsella grandiflora
Cagra.7993s0011 1.0kb upstream 1.0kb upstream 7565 true Scaffold7993: 53853-61417 Capsella grandiflora
Cagra.7993s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold7993: 53853-54852 Capsella grandiflora
Cagra.7993s0011 1.0kb downstream 1.0kb downstream 7565 true Scaffold7993: 54853-62417 Capsella grandiflora
Cagra.7993s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold7993: 61418-62417 Capsella grandiflora
Cagra.7993s0011 2.0kb upstream 2.0kb upstream 8565 true Scaffold7993: 52853-61417 Capsella grandiflora
Cagra.7993s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold7993: 52853-54852 Capsella grandiflora
Cagra.7993s0011 2.0kb downstream 2.0kb downstream 8565 true Scaffold7993: 54853-63417 Capsella grandiflora
Cagra.7993s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold7993: 61418-63417 Capsella grandiflora
Cagra.7993s0011 5.0kb upstream 5.0kb upstream 11565 true Scaffold7993: 49853-61417 Capsella grandiflora
Cagra.7993s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold7993: 49853-54852 Capsella grandiflora
Cagra.7993s0011 5.0kb downstream 5.0kb downstream 11565 true Scaffold7993: 54853-66417 Capsella grandiflora
Cagra.7993s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold7993: 61418-66417 Capsella grandiflora
Cagra.7993s0011 10.0kb upstream 10.0kb upstream 16565 true Scaffold7993: 44853-61417 Capsella grandiflora
Cagra.7993s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold7993: 44853-54852 Capsella grandiflora
Cagra.7993s0011 10.0kb downstream 10.0kb downstream 16565 true Scaffold7993: 54853-71417 Capsella grandiflora
Cagra.7993s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold7993: 61418-71417 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374474 5261 Brassicaceae View MSA
123834538 5264 Brassicales-Malvales View MSA
124341478 5266 SBM View MSA
124241436 5268 Malvidae View MSA
124066124 5270 Rosid View MSA
123740868 5271 Pentapetalae View MSA
122787151 5272 Eudicot View MSA
122046493 5273 Angiosperm View MSA
121346121 5274 Embryophyte View MSA
123425222 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain