Gene : Cagra.8005s0021 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10024:SF236 - ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  21
Name:  ? Cagra.8005s0021 Secondary Identifier:  ? PAC:28901881
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8005s0021 0.5kb upstream 0.5kb upstream 3839 true Scaffold8005: 81294-85132 Capsella grandiflora
Cagra.8005s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold8005: 84633-85132 Capsella grandiflora
Cagra.8005s0021 0.5kb downstream 0.5kb downstream 3839 true Scaffold8005: 80794-84632 Capsella grandiflora
Cagra.8005s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold8005: 80794-81293 Capsella grandiflora
Cagra.8005s0021 1.0kb upstream 1.0kb upstream 4339 true Scaffold8005: 81294-85632 Capsella grandiflora
Cagra.8005s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold8005: 84633-85632 Capsella grandiflora
Cagra.8005s0021 1.0kb downstream 1.0kb downstream 4339 true Scaffold8005: 80294-84632 Capsella grandiflora
Cagra.8005s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold8005: 80294-81293 Capsella grandiflora
Cagra.8005s0021 2.0kb upstream 2.0kb upstream 5339 true Scaffold8005: 81294-86632 Capsella grandiflora
Cagra.8005s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold8005: 84633-86632 Capsella grandiflora
Cagra.8005s0021 2.0kb downstream 2.0kb downstream 5339 true Scaffold8005: 79294-84632 Capsella grandiflora
Cagra.8005s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold8005: 79294-81293 Capsella grandiflora
Cagra.8005s0021 5.0kb upstream 5.0kb upstream 8339 true Scaffold8005: 81294-89632 Capsella grandiflora
Cagra.8005s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold8005: 84633-89632 Capsella grandiflora
Cagra.8005s0021 5.0kb downstream 5.0kb downstream 8339 true Scaffold8005: 76294-84632 Capsella grandiflora
Cagra.8005s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold8005: 76294-81293 Capsella grandiflora
Cagra.8005s0021 10.0kb upstream 10.0kb upstream 13339 true Scaffold8005: 81294-94632 Capsella grandiflora
Cagra.8005s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold8005: 84633-94632 Capsella grandiflora
Cagra.8005s0021 10.0kb downstream 10.0kb downstream 13339 true Scaffold8005: 71294-84632 Capsella grandiflora
Cagra.8005s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold8005: 71294-81293 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364098 5261 Brassicaceae View MSA
123830422 5264 Brassicales-Malvales View MSA
124342144 5266 SBM View MSA
124240863 5268 Malvidae View MSA
124063852 5270 Rosid View MSA
123737482 5271 Pentapetalae View MSA
122796289 5272 Eudicot View MSA
122048920 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain