Gene : Cagra.8024s0011 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12606:SF39 - UBIQUITIN-LIKE-SPECIFIC PROTEASE ESD4-RELATED Genomic Order:  11
Name:  ? Cagra.8024s0011 Secondary Identifier:  ? PAC:28896317
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8024s0011 0.5kb upstream 0.5kb upstream 3911 true Scaffold8024: 36156-40066 Capsella grandiflora
Cagra.8024s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold8024: 39567-40066 Capsella grandiflora
Cagra.8024s0011 0.5kb downstream 0.5kb downstream 3911 true Scaffold8024: 35656-39566 Capsella grandiflora
Cagra.8024s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold8024: 35656-36155 Capsella grandiflora
Cagra.8024s0011 1.0kb upstream 1.0kb upstream 4411 true Scaffold8024: 36156-40566 Capsella grandiflora
Cagra.8024s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold8024: 39567-40566 Capsella grandiflora
Cagra.8024s0011 1.0kb downstream 1.0kb downstream 4411 true Scaffold8024: 35156-39566 Capsella grandiflora
Cagra.8024s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold8024: 35156-36155 Capsella grandiflora
Cagra.8024s0011 2.0kb upstream 2.0kb upstream 5411 true Scaffold8024: 36156-41566 Capsella grandiflora
Cagra.8024s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold8024: 39567-41566 Capsella grandiflora
Cagra.8024s0011 2.0kb downstream 2.0kb downstream 5411 true Scaffold8024: 34156-39566 Capsella grandiflora
Cagra.8024s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold8024: 34156-36155 Capsella grandiflora
Cagra.8024s0011 5.0kb upstream 5.0kb upstream 6695 true Scaffold8024: 36156-42850 Capsella grandiflora
Cagra.8024s0011 5.0kb upstream 5.0kb upstream 3284 false Scaffold8024: 39567-42850 Capsella grandiflora
Cagra.8024s0011 5.0kb downstream 5.0kb downstream 8411 true Scaffold8024: 31156-39566 Capsella grandiflora
Cagra.8024s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold8024: 31156-36155 Capsella grandiflora
Cagra.8024s0011 10.0kb upstream 10.0kb upstream 6695 true Scaffold8024: 36156-42850 Capsella grandiflora
Cagra.8024s0011 10.0kb upstream 10.0kb upstream 3284 false Scaffold8024: 39567-42850 Capsella grandiflora
Cagra.8024s0011 10.0kb downstream 10.0kb downstream 13411 true Scaffold8024: 26156-39566 Capsella grandiflora
Cagra.8024s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold8024: 26156-36155 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373008 5261 Brassicaceae View MSA
123833191 5264 Brassicales-Malvales View MSA
124340870 5266 SBM View MSA
124240025 5268 Malvidae View MSA
124062657 5270 Rosid View MSA
123737823 5271 Pentapetalae View MSA
122797734 5272 Eudicot View MSA
122046617 5273 Angiosperm View MSA
121348677 5274 Embryophyte View MSA
123380965 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain