Gene : Cagra.8024s0005 C. grandiflora v1.1
Defline:  (1 of 1) KOG1535 - Predicted fumarylacetoacetate hydralase Genomic Order:  5
Name:  ? Cagra.8024s0005 Secondary Identifier:  ? PAC:28896309
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8024s0005 0.5kb upstream 0.5kb upstream 2744 true Scaffold8024: 14567-17310 Capsella grandiflora
Cagra.8024s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold8024: 16811-17310 Capsella grandiflora
Cagra.8024s0005 0.5kb downstream 0.5kb downstream 2744 true Scaffold8024: 14067-16810 Capsella grandiflora
Cagra.8024s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold8024: 14067-14566 Capsella grandiflora
Cagra.8024s0005 1.0kb upstream 1.0kb upstream 3244 true Scaffold8024: 14567-17810 Capsella grandiflora
Cagra.8024s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold8024: 16811-17810 Capsella grandiflora
Cagra.8024s0005 1.0kb downstream 1.0kb downstream 3244 true Scaffold8024: 13567-16810 Capsella grandiflora
Cagra.8024s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold8024: 13567-14566 Capsella grandiflora
Cagra.8024s0005 2.0kb upstream 2.0kb upstream 4244 true Scaffold8024: 14567-18810 Capsella grandiflora
Cagra.8024s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold8024: 16811-18810 Capsella grandiflora
Cagra.8024s0005 2.0kb downstream 2.0kb downstream 4244 true Scaffold8024: 12567-16810 Capsella grandiflora
Cagra.8024s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold8024: 12567-14566 Capsella grandiflora
Cagra.8024s0005 5.0kb upstream 5.0kb upstream 7244 true Scaffold8024: 14567-21810 Capsella grandiflora
Cagra.8024s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold8024: 16811-21810 Capsella grandiflora
Cagra.8024s0005 5.0kb downstream 5.0kb downstream 7244 true Scaffold8024: 9567-16810 Capsella grandiflora
Cagra.8024s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold8024: 9567-14566 Capsella grandiflora
Cagra.8024s0005 10.0kb upstream 10.0kb upstream 12244 true Scaffold8024: 14567-26810 Capsella grandiflora
Cagra.8024s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold8024: 16811-26810 Capsella grandiflora
Cagra.8024s0005 10.0kb downstream 10.0kb downstream 12244 true Scaffold8024: 4567-16810 Capsella grandiflora
Cagra.8024s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold8024: 4567-14566 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361329 5261 Brassicaceae View MSA
123831037 5264 Brassicales-Malvales View MSA
124336911 5266 SBM View MSA
124244236 5268 Malvidae View MSA
124068604 5270 Rosid View MSA
123743612 5271 Pentapetalae View MSA
122789161 5272 Eudicot View MSA
122046320 5273 Angiosperm View MSA
121345844 5274 Embryophyte View MSA
123427728 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain