Gene : Cagra.8085s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10257:SF27 - SERINE/THREONINE PROTEIN PHOSPHATASE 2A 59 KDA REGULATORY SUBUNIT B' GAMMA ISOFORM-RELATED Genomic Order:  5
Name:  ? Cagra.8085s0005 Secondary Identifier:  ? PAC:28906779
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8085s0005 0.5kb upstream 0.5kb upstream 3102 true Scaffold8085: 21575-24676 Capsella grandiflora
Cagra.8085s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold8085: 21575-22074 Capsella grandiflora
Cagra.8085s0005 0.5kb downstream 0.5kb downstream 3102 true Scaffold8085: 22075-25176 Capsella grandiflora
Cagra.8085s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold8085: 24677-25176 Capsella grandiflora
Cagra.8085s0005 1.0kb upstream 1.0kb upstream 3602 true Scaffold8085: 21075-24676 Capsella grandiflora
Cagra.8085s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold8085: 21075-22074 Capsella grandiflora
Cagra.8085s0005 1.0kb downstream 1.0kb downstream 3602 true Scaffold8085: 22075-25676 Capsella grandiflora
Cagra.8085s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold8085: 24677-25676 Capsella grandiflora
Cagra.8085s0005 2.0kb upstream 2.0kb upstream 4602 true Scaffold8085: 20075-24676 Capsella grandiflora
Cagra.8085s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold8085: 20075-22074 Capsella grandiflora
Cagra.8085s0005 2.0kb downstream 2.0kb downstream 4602 true Scaffold8085: 22075-26676 Capsella grandiflora
Cagra.8085s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold8085: 24677-26676 Capsella grandiflora
Cagra.8085s0005 5.0kb upstream 5.0kb upstream 7602 true Scaffold8085: 17075-24676 Capsella grandiflora
Cagra.8085s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold8085: 17075-22074 Capsella grandiflora
Cagra.8085s0005 5.0kb downstream 5.0kb downstream 7602 true Scaffold8085: 22075-29676 Capsella grandiflora
Cagra.8085s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold8085: 24677-29676 Capsella grandiflora
Cagra.8085s0005 10.0kb upstream 10.0kb upstream 12602 true Scaffold8085: 12075-24676 Capsella grandiflora
Cagra.8085s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold8085: 12075-22074 Capsella grandiflora
Cagra.8085s0005 10.0kb downstream 10.0kb downstream 12602 true Scaffold8085: 22075-34676 Capsella grandiflora
Cagra.8085s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold8085: 24677-34676 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369129 5261 Brassicaceae View MSA
123837710 5264 Brassicales-Malvales View MSA
124343222 5266 SBM View MSA
124243505 5268 Malvidae View MSA
124065822 5270 Rosid View MSA
123746976 5271 Pentapetalae View MSA
122787217 5272 Eudicot View MSA
122044522 5273 Angiosperm View MSA
121346157 5274 Embryophyte View MSA
123427992 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain