Gene : Cagra.8111s0008 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10943//PTHR10943:SF3 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT Genomic Order:  8
Name:  ? Cagra.8111s0008 Secondary Identifier:  ? PAC:28893984
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8111s0008 0.5kb upstream 0.5kb upstream 5606 true Scaffold8111: 45020-50625 Capsella grandiflora
Cagra.8111s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold8111: 45020-45519 Capsella grandiflora
Cagra.8111s0008 0.5kb downstream 0.5kb downstream 5606 true Scaffold8111: 45520-51125 Capsella grandiflora
Cagra.8111s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold8111: 50626-51125 Capsella grandiflora
Cagra.8111s0008 1.0kb upstream 1.0kb upstream 6106 true Scaffold8111: 44520-50625 Capsella grandiflora
Cagra.8111s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold8111: 44520-45519 Capsella grandiflora
Cagra.8111s0008 1.0kb downstream 1.0kb downstream 6106 true Scaffold8111: 45520-51625 Capsella grandiflora
Cagra.8111s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold8111: 50626-51625 Capsella grandiflora
Cagra.8111s0008 2.0kb upstream 2.0kb upstream 7106 true Scaffold8111: 43520-50625 Capsella grandiflora
Cagra.8111s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold8111: 43520-45519 Capsella grandiflora
Cagra.8111s0008 2.0kb downstream 2.0kb downstream 7106 true Scaffold8111: 45520-52625 Capsella grandiflora
Cagra.8111s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold8111: 50626-52625 Capsella grandiflora
Cagra.8111s0008 5.0kb upstream 5.0kb upstream 10106 true Scaffold8111: 40520-50625 Capsella grandiflora
Cagra.8111s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold8111: 40520-45519 Capsella grandiflora
Cagra.8111s0008 5.0kb downstream 5.0kb downstream 10106 true Scaffold8111: 45520-55625 Capsella grandiflora
Cagra.8111s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold8111: 50626-55625 Capsella grandiflora
Cagra.8111s0008 10.0kb upstream 10.0kb upstream 15106 true Scaffold8111: 35520-50625 Capsella grandiflora
Cagra.8111s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold8111: 35520-45519 Capsella grandiflora
Cagra.8111s0008 10.0kb downstream 10.0kb downstream 15106 true Scaffold8111: 45520-60625 Capsella grandiflora
Cagra.8111s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold8111: 50626-60625 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041470 5273 Angiosperm View MSA
122381781 5261 Brassicaceae View MSA
123803440 5264 Brassicales-Malvales View MSA
124300551 5266 SBM View MSA
124250936 5268 Malvidae View MSA
124068031 5270 Rosid View MSA
123746888 5271 Pentapetalae View MSA
122789074 5272 Eudicot View MSA
121346928 5274 Embryophyte View MSA
123424090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain