Gene : Cagra.8123s0005 C. grandiflora v1.1
Defline:  (1 of 27) PF14009 - Domain of unknown function (DUF4228) (DUF4228) Genomic Order:  5
Name:  ? Cagra.8123s0005 Secondary Identifier:  ? PAC:28894295
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8123s0005 0.5kb upstream 0.5kb upstream 1238 true Scaffold8123: 17314-18551 Capsella grandiflora
Cagra.8123s0005 0.5kb upstream 0.5kb upstream 482 false Scaffold8123: 18070-18551 Capsella grandiflora
Cagra.8123s0005 0.5kb downstream 0.5kb downstream 1256 true Scaffold8123: 16814-18069 Capsella grandiflora
Cagra.8123s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold8123: 16814-17313 Capsella grandiflora
Cagra.8123s0005 1.0kb upstream 1.0kb upstream 1238 true Scaffold8123: 17314-18551 Capsella grandiflora
Cagra.8123s0005 1.0kb upstream 1.0kb upstream 482 false Scaffold8123: 18070-18551 Capsella grandiflora
Cagra.8123s0005 1.0kb downstream 1.0kb downstream 1756 true Scaffold8123: 16314-18069 Capsella grandiflora
Cagra.8123s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold8123: 16314-17313 Capsella grandiflora
Cagra.8123s0005 2.0kb upstream 2.0kb upstream 1238 true Scaffold8123: 17314-18551 Capsella grandiflora
Cagra.8123s0005 2.0kb upstream 2.0kb upstream 482 false Scaffold8123: 18070-18551 Capsella grandiflora
Cagra.8123s0005 2.0kb downstream 2.0kb downstream 2756 true Scaffold8123: 15314-18069 Capsella grandiflora
Cagra.8123s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold8123: 15314-17313 Capsella grandiflora
Cagra.8123s0005 5.0kb upstream 5.0kb upstream 1238 true Scaffold8123: 17314-18551 Capsella grandiflora
Cagra.8123s0005 5.0kb upstream 5.0kb upstream 482 false Scaffold8123: 18070-18551 Capsella grandiflora
Cagra.8123s0005 5.0kb downstream 5.0kb downstream 5756 true Scaffold8123: 12314-18069 Capsella grandiflora
Cagra.8123s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold8123: 12314-17313 Capsella grandiflora
Cagra.8123s0005 10.0kb upstream 10.0kb upstream 1238 true Scaffold8123: 17314-18551 Capsella grandiflora
Cagra.8123s0005 10.0kb upstream 10.0kb upstream 482 false Scaffold8123: 18070-18551 Capsella grandiflora
Cagra.8123s0005 10.0kb downstream 10.0kb downstream 10756 true Scaffold8123: 7314-18069 Capsella grandiflora
Cagra.8123s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold8123: 7314-17313 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380432 5261 Brassicaceae View MSA
123828722 5264 Brassicales-Malvales View MSA
124338857 5266 SBM View MSA
124248622 5268 Malvidae View MSA
124068755 5270 Rosid View MSA
123746906 5271 Pentapetalae View MSA
122772060 5272 Eudicot View MSA
122050888 5273 Angiosperm View MSA
121312188 5274 Embryophyte View MSA
123349387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain