Gene : Cagra.8123s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR16223:SF19 - TRANSCRIPTION FACTOR BHLH83-RELATED Genomic Order:  1
Name:  ? Cagra.8123s0001 Secondary Identifier:  ? PAC:28894296
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8123s0001 0.5kb upstream 0.5kb upstream 1736 true Scaffold8123: 3165-4900 Capsella grandiflora
Cagra.8123s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold8123: 3165-3664 Capsella grandiflora
Cagra.8123s0001 0.5kb downstream 0.5kb downstream 1736 true Scaffold8123: 3665-5400 Capsella grandiflora
Cagra.8123s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold8123: 4901-5400 Capsella grandiflora
Cagra.8123s0001 1.0kb upstream 1.0kb upstream 2236 true Scaffold8123: 2665-4900 Capsella grandiflora
Cagra.8123s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold8123: 2665-3664 Capsella grandiflora
Cagra.8123s0001 1.0kb downstream 1.0kb downstream 2236 true Scaffold8123: 3665-5900 Capsella grandiflora
Cagra.8123s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold8123: 4901-5900 Capsella grandiflora
Cagra.8123s0001 2.0kb upstream 2.0kb upstream 3236 true Scaffold8123: 1665-4900 Capsella grandiflora
Cagra.8123s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold8123: 1665-3664 Capsella grandiflora
Cagra.8123s0001 2.0kb downstream 2.0kb downstream 3236 true Scaffold8123: 3665-6900 Capsella grandiflora
Cagra.8123s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold8123: 4901-6900 Capsella grandiflora
Cagra.8123s0001 5.0kb upstream 5.0kb upstream 4900 true Scaffold8123: 1-4900 Capsella grandiflora
Cagra.8123s0001 5.0kb upstream 5.0kb upstream 3664 false Scaffold8123: 1-3664 Capsella grandiflora
Cagra.8123s0001 5.0kb downstream 5.0kb downstream 6236 true Scaffold8123: 3665-9900 Capsella grandiflora
Cagra.8123s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold8123: 4901-9900 Capsella grandiflora
Cagra.8123s0001 10.0kb upstream 10.0kb upstream 4900 true Scaffold8123: 1-4900 Capsella grandiflora
Cagra.8123s0001 10.0kb upstream 10.0kb upstream 3664 false Scaffold8123: 1-3664 Capsella grandiflora
Cagra.8123s0001 10.0kb downstream 10.0kb downstream 11236 true Scaffold8123: 3665-14900 Capsella grandiflora
Cagra.8123s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold8123: 4901-14900 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381991 5261 Brassicaceae View MSA
123840367 5264 Brassicales-Malvales View MSA
124342678 5266 SBM View MSA
124253449 5268 Malvidae View MSA
124064521 5270 Rosid View MSA
123740675 5271 Pentapetalae View MSA
122794113 5272 Eudicot View MSA
122049843 5273 Angiosperm View MSA
121311613 5274 Embryophyte View MSA
123348888 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain