Gene : Cagra.8576s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33162:SF1 - SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC Genomic Order:  2
Name:  ? Cagra.8576s0002 Secondary Identifier:  ? PAC:28893682
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8576s0002 0.5kb upstream 0.5kb upstream 2136 true Scaffold8576: 3374-5509 Capsella grandiflora
Cagra.8576s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold8576: 5010-5509 Capsella grandiflora
Cagra.8576s0002 0.5kb downstream 0.5kb downstream 2136 true Scaffold8576: 2874-5009 Capsella grandiflora
Cagra.8576s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold8576: 2874-3373 Capsella grandiflora
Cagra.8576s0002 1.0kb upstream 1.0kb upstream 2636 true Scaffold8576: 3374-6009 Capsella grandiflora
Cagra.8576s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold8576: 5010-6009 Capsella grandiflora
Cagra.8576s0002 1.0kb downstream 1.0kb downstream 2636 true Scaffold8576: 2374-5009 Capsella grandiflora
Cagra.8576s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold8576: 2374-3373 Capsella grandiflora
Cagra.8576s0002 2.0kb upstream 2.0kb upstream 3636 true Scaffold8576: 3374-7009 Capsella grandiflora
Cagra.8576s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold8576: 5010-7009 Capsella grandiflora
Cagra.8576s0002 2.0kb downstream 2.0kb downstream 3636 true Scaffold8576: 1374-5009 Capsella grandiflora
Cagra.8576s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold8576: 1374-3373 Capsella grandiflora
Cagra.8576s0002 5.0kb upstream 5.0kb upstream 6636 true Scaffold8576: 3374-10009 Capsella grandiflora
Cagra.8576s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold8576: 5010-10009 Capsella grandiflora
Cagra.8576s0002 5.0kb downstream 5.0kb downstream 5009 true Scaffold8576: 1-5009 Capsella grandiflora
Cagra.8576s0002 5.0kb downstream 5.0kb downstream 3373 false Scaffold8576: 1-3373 Capsella grandiflora
Cagra.8576s0002 10.0kb upstream 10.0kb upstream 11636 true Scaffold8576: 3374-15009 Capsella grandiflora
Cagra.8576s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold8576: 5010-15009 Capsella grandiflora
Cagra.8576s0002 10.0kb downstream 10.0kb downstream 5009 true Scaffold8576: 1-5009 Capsella grandiflora
Cagra.8576s0002 10.0kb downstream 10.0kb downstream 3373 false Scaffold8576: 1-3373 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361408 5261 Brassicaceae View MSA
123827343 5264 Brassicales-Malvales View MSA
124343258 5266 SBM View MSA
124241314 5268 Malvidae View MSA
124067421 5270 Rosid View MSA
123742518 5271 Pentapetalae View MSA
122797436 5272 Eudicot View MSA
122042839 5273 Angiosperm View MSA
123429010 5275 Viridiplantae View MSA
121350142 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain