Gene : Cagra.7796s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33790:SF1 - PROTEIN EARLY RESPONSIVE TO DEHYDRATION 15 Genomic Order:  1
Name:  ? Cagra.7796s0001 Secondary Identifier:  ? PAC:28916417
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7796s0001 0.5kb upstream 0.5kb upstream 1470 true Scaffold7796: 1-1470 Capsella grandiflora
Cagra.7796s0001 0.5kb upstream 0.5kb upstream 221 false Scaffold7796: 1-221 Capsella grandiflora
Cagra.7796s0001 0.5kb downstream 0.5kb downstream 1569 true Scaffold7796: 222-1790 Capsella grandiflora
Cagra.7796s0001 0.5kb downstream 0.5kb downstream 320 false Scaffold7796: 1471-1790 Capsella grandiflora
Cagra.7796s0001 1.0kb upstream 1.0kb upstream 1470 true Scaffold7796: 1-1470 Capsella grandiflora
Cagra.7796s0001 1.0kb upstream 1.0kb upstream 221 false Scaffold7796: 1-221 Capsella grandiflora
Cagra.7796s0001 1.0kb downstream 1.0kb downstream 1569 true Scaffold7796: 222-1790 Capsella grandiflora
Cagra.7796s0001 1.0kb downstream 1.0kb downstream 320 false Scaffold7796: 1471-1790 Capsella grandiflora
Cagra.7796s0001 2.0kb upstream 2.0kb upstream 1470 true Scaffold7796: 1-1470 Capsella grandiflora
Cagra.7796s0001 2.0kb upstream 2.0kb upstream 221 false Scaffold7796: 1-221 Capsella grandiflora
Cagra.7796s0001 2.0kb downstream 2.0kb downstream 1569 true Scaffold7796: 222-1790 Capsella grandiflora
Cagra.7796s0001 2.0kb downstream 2.0kb downstream 320 false Scaffold7796: 1471-1790 Capsella grandiflora
Cagra.7796s0001 5.0kb upstream 5.0kb upstream 1470 true Scaffold7796: 1-1470 Capsella grandiflora
Cagra.7796s0001 5.0kb upstream 5.0kb upstream 221 false Scaffold7796: 1-221 Capsella grandiflora
Cagra.7796s0001 5.0kb downstream 5.0kb downstream 1569 true Scaffold7796: 222-1790 Capsella grandiflora
Cagra.7796s0001 5.0kb downstream 5.0kb downstream 320 false Scaffold7796: 1471-1790 Capsella grandiflora
Cagra.7796s0001 10.0kb upstream 10.0kb upstream 1470 true Scaffold7796: 1-1470 Capsella grandiflora
Cagra.7796s0001 10.0kb upstream 10.0kb upstream 221 false Scaffold7796: 1-221 Capsella grandiflora
Cagra.7796s0001 10.0kb downstream 10.0kb downstream 1569 true Scaffold7796: 222-1790 Capsella grandiflora
Cagra.7796s0001 10.0kb downstream 10.0kb downstream 320 false Scaffold7796: 1471-1790 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370488 5261 Brassicaceae View MSA
123830845 5264 Brassicales-Malvales View MSA
124339596 5266 SBM View MSA
124248566 5268 Malvidae View MSA
124070452 5270 Rosid View MSA
123742369 5271 Pentapetalae View MSA
122796171 5272 Eudicot View MSA
122048247 5273 Angiosperm View MSA
121345899 5274 Embryophyte View MSA
123380287 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain