Gene : Cagra.7865s0016 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31747:SF1 - PROTEIN LOL1 Genomic Order:  16
Name:  ? Cagra.7865s0016 Secondary Identifier:  ? PAC:28897954
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7865s0016 0.5kb upstream 0.5kb upstream 2704 true Scaffold7865: 61158-63861 Capsella grandiflora
Cagra.7865s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold7865: 61158-61657 Capsella grandiflora
Cagra.7865s0016 0.5kb downstream 0.5kb downstream 2704 true Scaffold7865: 61658-64361 Capsella grandiflora
Cagra.7865s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold7865: 63862-64361 Capsella grandiflora
Cagra.7865s0016 1.0kb upstream 1.0kb upstream 3204 true Scaffold7865: 60658-63861 Capsella grandiflora
Cagra.7865s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold7865: 60658-61657 Capsella grandiflora
Cagra.7865s0016 1.0kb downstream 1.0kb downstream 3204 true Scaffold7865: 61658-64861 Capsella grandiflora
Cagra.7865s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold7865: 63862-64861 Capsella grandiflora
Cagra.7865s0016 2.0kb upstream 2.0kb upstream 4204 true Scaffold7865: 59658-63861 Capsella grandiflora
Cagra.7865s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold7865: 59658-61657 Capsella grandiflora
Cagra.7865s0016 2.0kb downstream 2.0kb downstream 4204 true Scaffold7865: 61658-65861 Capsella grandiflora
Cagra.7865s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold7865: 63862-65861 Capsella grandiflora
Cagra.7865s0016 5.0kb upstream 5.0kb upstream 7204 true Scaffold7865: 56658-63861 Capsella grandiflora
Cagra.7865s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold7865: 56658-61657 Capsella grandiflora
Cagra.7865s0016 5.0kb downstream 5.0kb downstream 7204 true Scaffold7865: 61658-68861 Capsella grandiflora
Cagra.7865s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold7865: 63862-68861 Capsella grandiflora
Cagra.7865s0016 10.0kb upstream 10.0kb upstream 12204 true Scaffold7865: 51658-63861 Capsella grandiflora
Cagra.7865s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold7865: 51658-61657 Capsella grandiflora
Cagra.7865s0016 10.0kb downstream 10.0kb downstream 12204 true Scaffold7865: 61658-73861 Capsella grandiflora
Cagra.7865s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold7865: 63862-73861 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369915 5261 Brassicaceae View MSA
123833306 5264 Brassicales-Malvales View MSA
124337632 5266 SBM View MSA
124247932 5268 Malvidae View MSA
124064125 5270 Rosid View MSA
123749218 5271 Pentapetalae View MSA
122793241 5272 Eudicot View MSA
122043941 5273 Angiosperm View MSA
121347680 5274 Embryophyte View MSA
123425652 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain