Gene : Cagra.7865s0015 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10044:SF133 - MND1-INTERACTING PROTEIN 1 Genomic Order:  15
Name:  ? Cagra.7865s0015 Secondary Identifier:  ? PAC:28897957
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7865s0015 0.5kb upstream 0.5kb upstream 3613 true Scaffold7865: 53471-57083 Capsella grandiflora
Cagra.7865s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold7865: 56584-57083 Capsella grandiflora
Cagra.7865s0015 0.5kb downstream 0.5kb downstream 3613 true Scaffold7865: 52971-56583 Capsella grandiflora
Cagra.7865s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold7865: 52971-53470 Capsella grandiflora
Cagra.7865s0015 1.0kb upstream 1.0kb upstream 4113 true Scaffold7865: 53471-57583 Capsella grandiflora
Cagra.7865s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold7865: 56584-57583 Capsella grandiflora
Cagra.7865s0015 1.0kb downstream 1.0kb downstream 4113 true Scaffold7865: 52471-56583 Capsella grandiflora
Cagra.7865s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold7865: 52471-53470 Capsella grandiflora
Cagra.7865s0015 2.0kb upstream 2.0kb upstream 5113 true Scaffold7865: 53471-58583 Capsella grandiflora
Cagra.7865s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold7865: 56584-58583 Capsella grandiflora
Cagra.7865s0015 2.0kb downstream 2.0kb downstream 5113 true Scaffold7865: 51471-56583 Capsella grandiflora
Cagra.7865s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold7865: 51471-53470 Capsella grandiflora
Cagra.7865s0015 5.0kb upstream 5.0kb upstream 8113 true Scaffold7865: 53471-61583 Capsella grandiflora
Cagra.7865s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold7865: 56584-61583 Capsella grandiflora
Cagra.7865s0015 5.0kb downstream 5.0kb downstream 8113 true Scaffold7865: 48471-56583 Capsella grandiflora
Cagra.7865s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold7865: 48471-53470 Capsella grandiflora
Cagra.7865s0015 10.0kb upstream 10.0kb upstream 13113 true Scaffold7865: 53471-66583 Capsella grandiflora
Cagra.7865s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold7865: 56584-66583 Capsella grandiflora
Cagra.7865s0015 10.0kb downstream 10.0kb downstream 13113 true Scaffold7865: 43471-56583 Capsella grandiflora
Cagra.7865s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold7865: 43471-53470 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363603 5261 Brassicaceae View MSA
123839871 5264 Brassicales-Malvales View MSA
124337920 5266 SBM View MSA
124244525 5268 Malvidae View MSA
124064892 5270 Rosid View MSA
123750786 5271 Pentapetalae View MSA
122796031 5272 Eudicot View MSA
122045925 5273 Angiosperm View MSA
121349684 5274 Embryophyte View MSA
123427372 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain