Gene : Cagra.7917s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24104:SF13 - HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILY PROTEIN Genomic Order:  1
Name:  ? Cagra.7917s0001 Secondary Identifier:  ? PAC:28909862
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7917s0001 0.5kb upstream 0.5kb upstream 6416 true Scaffold7917: 2694-9109 Capsella grandiflora
Cagra.7917s0001 0.5kb upstream 0.5kb upstream 1 false Scaffold7917: 9109-9109 Capsella grandiflora
Cagra.7917s0001 0.5kb downstream 0.5kb downstream 6915 true Scaffold7917: 2194-9108 Capsella grandiflora
Cagra.7917s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold7917: 2194-2693 Capsella grandiflora
Cagra.7917s0001 1.0kb upstream 1.0kb upstream 6416 true Scaffold7917: 2694-9109 Capsella grandiflora
Cagra.7917s0001 1.0kb upstream 1.0kb upstream 1 false Scaffold7917: 9109-9109 Capsella grandiflora
Cagra.7917s0001 1.0kb downstream 1.0kb downstream 7415 true Scaffold7917: 1694-9108 Capsella grandiflora
Cagra.7917s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold7917: 1694-2693 Capsella grandiflora
Cagra.7917s0001 2.0kb upstream 2.0kb upstream 6416 true Scaffold7917: 2694-9109 Capsella grandiflora
Cagra.7917s0001 2.0kb upstream 2.0kb upstream 1 false Scaffold7917: 9109-9109 Capsella grandiflora
Cagra.7917s0001 2.0kb downstream 2.0kb downstream 8415 true Scaffold7917: 694-9108 Capsella grandiflora
Cagra.7917s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold7917: 694-2693 Capsella grandiflora
Cagra.7917s0001 5.0kb upstream 5.0kb upstream 6416 true Scaffold7917: 2694-9109 Capsella grandiflora
Cagra.7917s0001 5.0kb upstream 5.0kb upstream 1 false Scaffold7917: 9109-9109 Capsella grandiflora
Cagra.7917s0001 5.0kb downstream 5.0kb downstream 9108 true Scaffold7917: 1-9108 Capsella grandiflora
Cagra.7917s0001 5.0kb downstream 5.0kb downstream 2693 false Scaffold7917: 1-2693 Capsella grandiflora
Cagra.7917s0001 10.0kb upstream 10.0kb upstream 6416 true Scaffold7917: 2694-9109 Capsella grandiflora
Cagra.7917s0001 10.0kb upstream 10.0kb upstream 1 false Scaffold7917: 9109-9109 Capsella grandiflora
Cagra.7917s0001 10.0kb downstream 10.0kb downstream 9108 true Scaffold7917: 1-9108 Capsella grandiflora
Cagra.7917s0001 10.0kb downstream 10.0kb downstream 2693 false Scaffold7917: 1-2693 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334312 5261 Brassicaceae Singleton cluster - no MSA
123838051 5264 Brassicales-Malvales View MSA
124336896 5266 SBM View MSA
124237691 5268 Malvidae View MSA
124061821 5270 Rosid View MSA
123738220 5271 Pentapetalae View MSA
122791957 5272 Eudicot View MSA
122045545 5273 Angiosperm View MSA
121344025 5274 Embryophyte View MSA
123424859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain