Gene : Cagra.7974s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22952//PTHR22952:SF143 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED Genomic Order:  4
Name:  ? Cagra.7974s0004 Secondary Identifier:  ? PAC:28905486
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7974s0004 0.5kb upstream 0.5kb upstream 1537 true Scaffold7974: 7970-9506 Capsella grandiflora
Cagra.7974s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold7974: 7970-8469 Capsella grandiflora
Cagra.7974s0004 0.5kb downstream 0.5kb downstream 1537 true Scaffold7974: 8470-10006 Capsella grandiflora
Cagra.7974s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold7974: 9507-10006 Capsella grandiflora
Cagra.7974s0004 1.0kb upstream 1.0kb upstream 2037 true Scaffold7974: 7470-9506 Capsella grandiflora
Cagra.7974s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold7974: 7470-8469 Capsella grandiflora
Cagra.7974s0004 1.0kb downstream 1.0kb downstream 2037 true Scaffold7974: 8470-10506 Capsella grandiflora
Cagra.7974s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold7974: 9507-10506 Capsella grandiflora
Cagra.7974s0004 2.0kb upstream 2.0kb upstream 3037 true Scaffold7974: 6470-9506 Capsella grandiflora
Cagra.7974s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold7974: 6470-8469 Capsella grandiflora
Cagra.7974s0004 2.0kb downstream 2.0kb downstream 3037 true Scaffold7974: 8470-11506 Capsella grandiflora
Cagra.7974s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold7974: 9507-11506 Capsella grandiflora
Cagra.7974s0004 5.0kb upstream 5.0kb upstream 6037 true Scaffold7974: 3470-9506 Capsella grandiflora
Cagra.7974s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold7974: 3470-8469 Capsella grandiflora
Cagra.7974s0004 5.0kb downstream 5.0kb downstream 6037 true Scaffold7974: 8470-14506 Capsella grandiflora
Cagra.7974s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold7974: 9507-14506 Capsella grandiflora
Cagra.7974s0004 10.0kb upstream 10.0kb upstream 9506 true Scaffold7974: 1-9506 Capsella grandiflora
Cagra.7974s0004 10.0kb upstream 10.0kb upstream 8469 false Scaffold7974: 1-8469 Capsella grandiflora
Cagra.7974s0004 10.0kb downstream 10.0kb downstream 11037 true Scaffold7974: 8470-19506 Capsella grandiflora
Cagra.7974s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold7974: 9507-19506 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377750 5261 Brassicaceae View MSA
123829768 5264 Brassicales-Malvales View MSA
124340437 5266 SBM View MSA
124250601 5268 Malvidae View MSA
124070916 5270 Rosid View MSA
123746178 5271 Pentapetalae View MSA
122797836 5272 Eudicot View MSA
122044806 5273 Angiosperm View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain