Gene : Cagra.7654s0001 C. grandiflora v1.1
Defline:  (1 of 35) PF00005//PF00664 - ABC transporter (ABC_tran) // ABC transporter transmembrane region (ABC_membrane) Genomic Order:  1
Name:  ? Cagra.7654s0001 Secondary Identifier:  ? PAC:28893671
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7654s0001 0.5kb upstream 0.5kb upstream 6529 true Scaffold7654: 2044-8572 Capsella grandiflora
Cagra.7654s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold7654: 2044-2543 Capsella grandiflora
Cagra.7654s0001 0.5kb downstream 0.5kb downstream 6529 true Scaffold7654: 2544-9072 Capsella grandiflora
Cagra.7654s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold7654: 8573-9072 Capsella grandiflora
Cagra.7654s0001 1.0kb upstream 1.0kb upstream 7029 true Scaffold7654: 1544-8572 Capsella grandiflora
Cagra.7654s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold7654: 1544-2543 Capsella grandiflora
Cagra.7654s0001 1.0kb downstream 1.0kb downstream 7029 true Scaffold7654: 2544-9572 Capsella grandiflora
Cagra.7654s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold7654: 8573-9572 Capsella grandiflora
Cagra.7654s0001 2.0kb upstream 2.0kb upstream 8029 true Scaffold7654: 544-8572 Capsella grandiflora
Cagra.7654s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold7654: 544-2543 Capsella grandiflora
Cagra.7654s0001 2.0kb downstream 2.0kb downstream 8029 true Scaffold7654: 2544-10572 Capsella grandiflora
Cagra.7654s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold7654: 8573-10572 Capsella grandiflora
Cagra.7654s0001 5.0kb upstream 5.0kb upstream 8572 true Scaffold7654: 1-8572 Capsella grandiflora
Cagra.7654s0001 5.0kb upstream 5.0kb upstream 2543 false Scaffold7654: 1-2543 Capsella grandiflora
Cagra.7654s0001 5.0kb downstream 5.0kb downstream 11029 true Scaffold7654: 2544-13572 Capsella grandiflora
Cagra.7654s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold7654: 8573-13572 Capsella grandiflora
Cagra.7654s0001 10.0kb upstream 10.0kb upstream 8572 true Scaffold7654: 1-8572 Capsella grandiflora
Cagra.7654s0001 10.0kb upstream 10.0kb upstream 2543 false Scaffold7654: 1-2543 Capsella grandiflora
Cagra.7654s0001 10.0kb downstream 10.0kb downstream 16029 true Scaffold7654: 2544-18572 Capsella grandiflora
Cagra.7654s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold7654: 8573-18572 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372124 5261 Brassicaceae View MSA
123837411 5264 Brassicales-Malvales View MSA
124338738 5266 SBM View MSA
124239270 5268 Malvidae View MSA
124072501 5270 Rosid View MSA
123739831 5271 Pentapetalae View MSA
122793559 5272 Eudicot View MSA
122043671 5273 Angiosperm View MSA
121348090 5274 Embryophyte View MSA
123380726 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain