Gene : Cagra.7654s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24322:SF575 - ROSSMANN-FOLD NAD(P)-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  2
Name:  ? Cagra.7654s0002 Secondary Identifier:  ? PAC:28893669
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora FASYN-ELONG-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-5156 Capsella grandiflora pathologic  
Cgrandiflora PWY-5971 Capsella grandiflora pathologic  
Cgrandiflora PWY-5973 Capsella grandiflora pathologic  
Cgrandiflora PWY-5989 Capsella grandiflora pathologic  
Cgrandiflora PWY-6282 Capsella grandiflora pathologic  
Cgrandiflora PWY-7388 Capsella grandiflora pathologic  
Cgrandiflora PWY-7663 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7654s0002 0.5kb upstream 0.5kb upstream 1829 true Scaffold7654: 8781-10609 Capsella grandiflora
Cagra.7654s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold7654: 10110-10609 Capsella grandiflora
Cagra.7654s0002 0.5kb downstream 0.5kb downstream 1829 true Scaffold7654: 8281-10109 Capsella grandiflora
Cagra.7654s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold7654: 8281-8780 Capsella grandiflora
Cagra.7654s0002 1.0kb upstream 1.0kb upstream 2329 true Scaffold7654: 8781-11109 Capsella grandiflora
Cagra.7654s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold7654: 10110-11109 Capsella grandiflora
Cagra.7654s0002 1.0kb downstream 1.0kb downstream 2329 true Scaffold7654: 7781-10109 Capsella grandiflora
Cagra.7654s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold7654: 7781-8780 Capsella grandiflora
Cagra.7654s0002 2.0kb upstream 2.0kb upstream 3329 true Scaffold7654: 8781-12109 Capsella grandiflora
Cagra.7654s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold7654: 10110-12109 Capsella grandiflora
Cagra.7654s0002 2.0kb downstream 2.0kb downstream 3329 true Scaffold7654: 6781-10109 Capsella grandiflora
Cagra.7654s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold7654: 6781-8780 Capsella grandiflora
Cagra.7654s0002 5.0kb upstream 5.0kb upstream 6329 true Scaffold7654: 8781-15109 Capsella grandiflora
Cagra.7654s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold7654: 10110-15109 Capsella grandiflora
Cagra.7654s0002 5.0kb downstream 5.0kb downstream 6329 true Scaffold7654: 3781-10109 Capsella grandiflora
Cagra.7654s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold7654: 3781-8780 Capsella grandiflora
Cagra.7654s0002 10.0kb upstream 10.0kb upstream 11329 true Scaffold7654: 8781-20109 Capsella grandiflora
Cagra.7654s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold7654: 10110-20109 Capsella grandiflora
Cagra.7654s0002 10.0kb downstream 10.0kb downstream 10109 true Scaffold7654: 1-10109 Capsella grandiflora
Cagra.7654s0002 10.0kb downstream 10.0kb downstream 8780 false Scaffold7654: 1-8780 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379286 5261 Brassicaceae View MSA
123835400 5264 Brassicales-Malvales View MSA
124349739 5266 SBM View MSA
124251104 5268 Malvidae View MSA
124062329 5270 Rosid View MSA
123751674 5271 Pentapetalae View MSA
122788273 5272 Eudicot View MSA
122044153 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121344803 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain