Gene : Cagra.7520s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED Genomic Order:  2
Name:  ? Cagra.7520s0002 Secondary Identifier:  ? PAC:28895414
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7520s0002 0.5kb upstream 0.5kb upstream 3564 true Scaffold7520: 14815-18378 Capsella grandiflora
Cagra.7520s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold7520: 14815-15314 Capsella grandiflora
Cagra.7520s0002 0.5kb downstream 0.5kb downstream 3564 true Scaffold7520: 15315-18878 Capsella grandiflora
Cagra.7520s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold7520: 18379-18878 Capsella grandiflora
Cagra.7520s0002 1.0kb upstream 1.0kb upstream 4064 true Scaffold7520: 14315-18378 Capsella grandiflora
Cagra.7520s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold7520: 14315-15314 Capsella grandiflora
Cagra.7520s0002 1.0kb downstream 1.0kb downstream 4064 true Scaffold7520: 15315-19378 Capsella grandiflora
Cagra.7520s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold7520: 18379-19378 Capsella grandiflora
Cagra.7520s0002 2.0kb upstream 2.0kb upstream 5064 true Scaffold7520: 13315-18378 Capsella grandiflora
Cagra.7520s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold7520: 13315-15314 Capsella grandiflora
Cagra.7520s0002 2.0kb downstream 2.0kb downstream 5064 true Scaffold7520: 15315-20378 Capsella grandiflora
Cagra.7520s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold7520: 18379-20378 Capsella grandiflora
Cagra.7520s0002 5.0kb upstream 5.0kb upstream 8064 true Scaffold7520: 10315-18378 Capsella grandiflora
Cagra.7520s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold7520: 10315-15314 Capsella grandiflora
Cagra.7520s0002 5.0kb downstream 5.0kb downstream 8064 true Scaffold7520: 15315-23378 Capsella grandiflora
Cagra.7520s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold7520: 18379-23378 Capsella grandiflora
Cagra.7520s0002 10.0kb upstream 10.0kb upstream 13064 true Scaffold7520: 5315-18378 Capsella grandiflora
Cagra.7520s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold7520: 5315-15314 Capsella grandiflora
Cagra.7520s0002 10.0kb downstream 10.0kb downstream 13064 true Scaffold7520: 15315-28378 Capsella grandiflora
Cagra.7520s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold7520: 18379-28378 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362936 5261 Brassicaceae View MSA
123837808 5264 Brassicales-Malvales View MSA
124345339 5266 SBM View MSA
124250901 5268 Malvidae View MSA
124074803 5270 Rosid View MSA
123747092 5271 Pentapetalae View MSA
122794545 5272 Eudicot View MSA
122045232 5273 Angiosperm View MSA
121347746 5274 Embryophyte View MSA
123380612 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain